Gene Card
Best human hits
NXF1; NXF2; NXF2B
Species
Unique Gene ID
Phmamm.g00006222
Gene Model ID
Phmamm.CG.MTP2014.S256.g06222
Location
S256:99062..105946
Transcript Models and Sequences
Genoscope Yasuo Villefranche
4 results
AHC0AAA116YI21
Plate: Plate_116_I21
AHC0AAA147YD04
Plate: Plate_147_D04
AHC0AAA84YA02
Plate: Plate_84_A02
AHC0AAA147YD02
Plate: Plate_147_D02
n/a
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
7 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Nucleotide-bd_a/b_plait_sf | Gene3D | Nucleotide-binding alpha-beta plait domain superfamily |
| LRR_dom_sf | Gene3D | Leucine-rich repeat domain superfamily |
| Leu-rich_rpt | ProSiteProfiles | Leucine-rich repeat |
| Tap_RNA-bd | Pfam | Nuclear RNA export factor Tap, RNA-binding domain |
| NXF_fam | PANTHER | Nuclear RNA export factor |
| RBD_domain_sf | SUPERFAMILY | RNA-binding domain superfamily |
| Tap_RNA-bd | ProDom | Nuclear RNA export factor Tap, RNA-binding domain |
GOSlim
17 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nucleic acid binding | Orthology | molecular function |
| RNA binding | Orthology | molecular function |
| protein binding | Orthology | molecular function |
| nucleus | Orthology | cellular component |
| nucleoplasm | Orthology | cellular component |
| cytoplasm | Orthology | cellular component |
| cytosol | Orthology | cellular component |
| multicellular organism development | Orthology | biological process |
| nuclear speck | Orthology | cellular component |
| nuclear part | Orthology | cellular component |
| macromolecular complex | Orthology | cellular component |
| nuclear envelope | Orthology | cellular component |
| organic substance transport | Orthology | biological process |
| intracellular transport | Orthology | biological process |
| intracellular protein transport | Orthology | biological process |
| gene expression | Orthology | biological process |
| nucleoplasm part | Orthology | cellular component |
GO (Orthology)
20 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| transcription export complex | Hs | cellular component |
| nucleic acid binding | Hs | molecular function |
| RNA binding | Hs | molecular function |
| mRNA binding | Hs | molecular function |
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nuclear pore | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| cytoplasm | Hs | cellular component |
| cytosol | Hs | cellular component |
| RNA export from nucleus | Hs | biological process |
| mRNA export from nucleus | Hs | biological process |
| multicellular organism development | Hs | biological process |
| viral process | Hs | biological process |
| nuclear speck | Hs | cellular component |
| poly(A)+ mRNA export from nucleus | Hs | biological process |
| nuclear RNA export factor complex | Hs | cellular component |
| nuclear inclusion body | Hs | cellular component |
| RNA transport | Hs | biological process |
| mRNA transport | Hs | biological process |
GO (Blast)
13 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| transcription export complex | Hs | cellular component | 206 | 5.77e-60 |
| nucleic acid binding | Hs | molecular function | 206 | 5.77e-60 |
| RNA binding | Hs | molecular function | 206 | 5.77e-60 |
| mRNA binding | Hs | molecular function | 206 | 5.77e-60 |
| protein binding | Hs | molecular function | 206 | 5.77e-60 |
| nucleus | Hs | cellular component | 206 | 5.77e-60 |
| nuclear pore | Hs | cellular component | 206 | 5.77e-60 |
| nucleoplasm | Hs | cellular component | 206 | 5.77e-60 |
| cytoplasm | Hs | cellular component | 206 | 5.77e-60 |
| cytosol | Hs | cellular component | 206 | 5.77e-60 |
| nuclear speck | Hs | cellular component | 206 | 5.77e-60 |
| nuclear RNA export factor complex | Hs | cellular component | 158 | 1.43e-42 |
| nuclear inclusion body | Hs | cellular component | 206 | 5.77e-60 |
GO (InterProScan)
6 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | SUPERFAMILY | molecular function | 3.59E-17 |
| RNA binding | Pfam | molecular function | 6.7E-24 |
| protein binding | ProSiteProfiles | molecular function | 7.057 |
| nucleus | Pfam | cellular component | 6.7E-24 |
| cytoplasm | Pfam | cellular component | 6.7E-24 |
| mRNA export from nucleus | Pfam | biological process | 6.7E-24 |
