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GENE CARD

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Gene Card

Best human hits

PIWIL1; PIWIL4

Species

P.mammillata

Unique Gene ID

Phmamm.g00006409

Gene Model ID

Phmamm.CG.MTP2014.S268.g06409

Location

S268:61218..67200

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S268.g06409.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

11 results

AHC0AAA58YK23

Plate: Plate_58_K23

AHC0AAA120YG14

Plate: Plate_120_G14

AHC0AAA133YI20

Plate: Plate_133_I20

AHC0AAA142YL10

Plate: Plate_142_L10

AHC0AAA150YL04

Plate: Plate_150_L04

AHC0AAA133YI18

Plate: Plate_133_I18

AHC0AAA171YI23

Plate: Plate_171_I23

AHC0AAA191YE10

Plate: Plate_191_E10

AHC0AAA208YO24

Plate: Plate_208_O24

AHC0AAA237YK18

Plate: Plate_237_K18

AHC0AAA269YF05

Plate: Plate_269_F05

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
RNaseH_sf Gene3D Ribonuclease H superfamily
PAZ_dom_sf SUPERFAMILY PAZ domain superfamily
Piwi ProSiteProfiles Piwi domain
PAZ_dom ProSiteProfiles PAZ domain
PAZ_dom Pfam PAZ domain
RNaseH-like_sf SUPERFAMILY Ribonuclease H-like superfamily
PAZ_dom SMART PAZ domain
Piwi Pfam Piwi domain
Piwi SMART Piwi domain

GOSlim

25 results

GO Term Annotation Origin Type
nucleic acid binding Orthology molecular function
RNA binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
cytoplasm Orthology cellular component
multicellular organism development Orthology biological process
spermatogenesis Orthology biological process
hydrolase activity Orthology molecular function
protein kinase binding Orthology molecular function
cell differentiation Orthology biological process
metal ion binding Orthology molecular function
RNA metabolic process Orthology biological process
macromolecular complex Orthology cellular component
intracellular part Orthology cellular component
regulation of gene expression Orthology biological process
cell development Orthology biological process
negative regulation of gene expression Orthology biological process
cellular process Orthology biological process
cytoplasmic part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
organelle organization Orthology biological process
DNA binding Orthology molecular function
DNA metabolic process Orthology biological process
gamete generation Orthology biological process
reproductive process Orthology biological process

GO (Orthology)

33 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleic acid binding Hs molecular function
RNA binding Hs molecular function
single-stranded RNA binding Hs molecular function
mRNA binding Hs molecular function
nuclease activity Hs molecular function
endonuclease activity Hs molecular function
endoribonuclease activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
polysome Hs cellular component
mRNA cap binding complex Hs cellular component
regulation of translation Hs biological process
multicellular organism development Hs biological process
spermatogenesis Hs biological process
spermatid development Hs biological process
negative regulation of transposition Hs biological process
hydrolase activity Hs molecular function
protein kinase binding Hs molecular function
cell differentiation Hs biological process
gene silencing by RNA Hs biological process
chromatoid body Hs cellular component
piRNA binding Hs molecular function
piRNA metabolic process Hs biological process
spermatogenesis, exchange of chromosomal proteins Hs biological process
DNA methylation involved in gamete generation Hs biological process
P granule Hs cellular component
metal ion binding Hs molecular function
meiotic cell cycle Hs biological process
piP-body Hs cellular component
nucleic acid phosphodiester bond hydrolysis Hs biological process
RNA phosphodiester bond hydrolysis, endonucleolytic Hs biological process
dense body Hs cellular component

GO (Blast)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 716 0.0
RNA binding Hs molecular function 716 0.0
single-stranded RNA binding Hs molecular function 716 0.0
mRNA binding Hs molecular function 716 0.0
nuclease activity Hs molecular function 716 0.0
endonuclease activity Hs molecular function 716 0.0
endoribonuclease activity Hs molecular function 716 0.0
protein binding Hs molecular function 716 0.0
nucleus Hs cellular component 716 0.0
cytoplasm Hs cellular component 716 0.0
polysome Hs cellular component 716 0.0
mRNA cap binding complex Hs cellular component 716 0.0
hydrolase activity Hs molecular function 716 0.0
protein kinase binding Hs molecular function 716 0.0
chromatoid body Hs cellular component 716 0.0
piRNA binding Hs molecular function 716 0.0
P granule Hs cellular component 716 0.0
metal ion binding Hs molecular function 716 0.0
piP-body Hs cellular component 582 0.0
dense body Hs cellular component 716 0.0

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 5.9E-118
protein binding SUPERFAMILY molecular function 1.0E-72