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GENE CARD

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Gene Card

Best human hits

STRN; STRN3; STRN4

Species

P.mammillata

Unique Gene ID

Phmamm.g00006568

Gene Model ID

Phmamm.CG.MTP2014.S277.g06568

Location

S277:56004..71322

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

22 results

AHC0AAA18YI20

Plate: Plate_18_I20

AHC0AAA23YI13

Plate: Plate_23_I13

AHC0AAA7YC01

Plate: Plate_7_C01

AHC0AAA43YN06

Plate: Plate_43_N06

AHC0AAA51YK21

Plate: Plate_51_K21

AHC0AAA55YD20

Plate: Plate_55_D20

AHC0AAA60YP09

Plate: Plate_60_P09

AHC0AAA61YB20

Plate: Plate_61_B20

AHC0AAA63YF13

Plate: Plate_63_F13

AHC0AAA64YO13

Plate: Plate_64_O13

AHC0AAA120YH04

Plate: Plate_120_H04

AHC0AAA127YI11

Plate: Plate_127_I11

AHC0AAA142YK15

Plate: Plate_142_K15

AHC0AAA156YP11

Plate: Plate_156_P11

AHC0AAA81YH22

Plate: Plate_81_H22

AHC0AAA88YA04

Plate: Plate_88_A04

AHC0AAA120YH02

Plate: Plate_120_H02

AHC0AAA168YC17

Plate: Plate_168_C17

AHC0AAA232YB24

Plate: Plate_232_B24

AHC0AAA233YH11

Plate: Plate_233_H11

AHC0AAA251YF04

Plate: Plate_251_F04

AHC0AAA55YD18

Plate: Plate_55_D18

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
WD40_repeat_CS ProSitePatterns WD40 repeat, conserved site
WD40_repeat ProSiteProfiles WD40 repeat
Striatin_N Pfam Striatin, N-terminal
WD40_repeat_dom ProSiteProfiles WD40-repeat-containing domain
WD40_repeat Pfam WD40 repeat
WD40_repeat SMART WD40 repeat
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily
G-protein_beta_WD-40_rep PRINTS G-protein beta WD-40 repeat

GOSlim

28 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
calmodulin binding Orthology molecular function
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
Golgi apparatus Orthology cellular component
plasma membrane Orthology cellular component
negative regulation of cell proliferation Orthology biological process
membrane Orthology cellular component
macromolecular complex Orthology cellular component
cell projection Orthology cellular component
neuronal cell body Orthology cellular component
macromolecular complex binding Orthology molecular function
postsynaptic membrane Orthology cellular component
negative regulation of transcription, DNA-templated Orthology biological process
intracellular part Orthology cellular component
cell junction Orthology cellular component
organelle Orthology cellular component
postsynapse Orthology cellular component
neuron part Orthology cellular component
cell surface receptor signaling pathway Orthology biological process
cell-cell signaling Orthology biological process
neuron projection development Orthology biological process
enzyme binding Orthology molecular function
receptor binding Orthology molecular function
transcription factor binding Orthology molecular function
response to lipid Orthology biological process
negative regulation of signal transduction Orthology biological process
cellular response to organic substance Orthology biological process

GO (Orthology)

30 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein phosphatase type 2A complex Hs cellular component
protein binding Hs molecular function
calmodulin binding Hs molecular function
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
Golgi apparatus Hs cellular component
plasma membrane Hs cellular component
bicellular tight junction Hs cellular component
locomotory behavior Hs biological process
negative regulation of cell proliferation Hs biological process
postsynaptic density Hs cellular component
membrane Hs cellular component
Wnt signaling pathway Hs biological process
dendrite development Hs biological process
Rho GTPase binding Hs molecular function
protein domain specific binding Hs molecular function
estrogen receptor binding Hs molecular function
dendrite Hs cellular component
response to estradiol Hs biological process
macromolecular complex Hs cellular component
negative regulation of intracellular estrogen receptor signaling pathway Hs biological process
cell projection Hs cellular component
neuronal cell body Hs cellular component
dendritic spine Hs cellular component
macromolecular complex binding Hs molecular function
postsynaptic membrane Hs cellular component
negative regulation of transcription, DNA-templated Hs biological process
protein phosphatase 2A binding Hs molecular function
armadillo repeat domain binding Hs molecular function
bicellular tight junction assembly Hs biological process

GO (Blast)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protein phosphatase type 2A complex Hs cellular component 707 0.0
protein binding Hs molecular function 707 0.0
calmodulin binding Hs molecular function 707 0.0
nucleoplasm Hs cellular component 707 0.0
cytoplasm Hs cellular component 707 0.0
Golgi apparatus Hs cellular component 707 0.0
plasma membrane Hs cellular component 707 0.0
bicellular tight junction Hs cellular component 678 0.0
postsynaptic density Hs cellular component 678 0.0
membrane Hs cellular component 707 0.0
Rho GTPase binding Hs molecular function 707 0.0
protein domain specific binding Hs molecular function 575 0.0
estrogen receptor binding Hs molecular function 678 0.0
dendrite Hs cellular component 707 0.0
macromolecular complex Hs cellular component 707 0.0
cell projection Hs cellular component 678 0.0
neuronal cell body Hs cellular component 707 0.0
dendritic spine Hs cellular component 678 0.0
macromolecular complex binding Hs molecular function 707 0.0
postsynaptic membrane Hs cellular component 678 0.0
protein phosphatase 2A binding Hs molecular function 707 0.0
armadillo repeat domain binding Hs molecular function 707 0.0

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 5.86E-65