Aniseed - Gene card

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Genoscope Yasuo Villefranche

1 result

AHC0AAA173YD17

Plate: Plate_173_D17

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Gene Annotations

InterPro

11 results

IPR Term	Analysis	Definition
MoaA	TIGRFAM	Molybdenum cofactor biosynthesis protein A
rSAM	SFLD	Radical SAM
rSAM	Pfam	Radical SAM
Mob_synth_C	Pfam	Molybdenum cofactor synthesis C-terminal
MoaA_NifB_PqqE_Fe-S-bd_CS	ProSitePatterns	MoaA/nifB/pqqE, iron-sulphur binding, conserved site
Elp3/MiaB/NifB	SMART	Elp3/MiaB/NifB
Aldolase_TIM	Gene3D	Aldolase-type TIM barrel
Ribosomal_S13_CS	ProSitePatterns	Ribosomal protein S13, conserved site
Ribosomal_S13	Pfam	Ribosomal protein S13
Ribosomal_S13-like_H2TH	SUPERFAMILY	Ribosomal protein S13-like, H2TH
Ribosomal_S13	ProSiteProfiles	Ribosomal protein S13

GOSlim

30 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
catalytic activity	Orthology	molecular function
protein binding	Blast	molecular function
GTP binding	Orthology	molecular function
nucleus	Orthology	cellular component
mitochondrion	Blast	cellular component
mitochondrial inner membrane	Blast	cellular component
endoplasmic reticulum	Blast	cellular component
endoplasmic reticulum membrane	Blast	cellular component
Golgi apparatus	Blast	cellular component
cytosol	Orthology	cellular component
membrane	Blast	cellular component
metal ion binding	Orthology	molecular function
nucleic acid binding	InterProScan	molecular function
RNA binding	InterProScan	molecular function
structural constituent of ribosome	InterProScan	molecular function
intracellular	InterProScan	cellular component
ribosome	InterProScan	cellular component
phosphate-containing compound metabolic process	Orthology	biological process
transferase activity	Orthology	molecular function
cellular protein modification process	Orthology	biological process
macromolecular complex	Orthology	cellular component
cell part	Orthology	cellular component
transferase activity, transferring phosphorus-containing groups	Orthology	molecular function
cofactor binding	Orthology	molecular function
nucleolus	Blast	cellular component
whole membrane	Blast	cellular component
mitochondrial membrane	Blast	cellular component
bounding membrane of organelle	Blast	cellular component
intracellular non-membrane-bounded organelle	Blast	cellular component

GO (Orthology)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
catalytic activity	Hs	molecular function
GTP binding	Hs	molecular function
nucleus	Hs	cellular component
cytosol	Hs	cellular component
Mo-molybdopterin cofactor biosynthetic process	Hs	biological process
lyase activity	Hs	molecular function
molybdopterin synthase complex	Hs	cellular component
molybdopterin cofactor biosynthetic process	Hs	biological process
metal ion binding	Hs	molecular function
iron-sulfur cluster binding	Hs	molecular function
4 iron, 4 sulfur cluster binding	Hs	molecular function
GTP 3',8'-cyclase activity	Hs	molecular function
cyclic pyranopterin monophosphate synthase activity	Hs	molecular function

GO (Blast)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	377	4.31e-127
fibrillar center	Hs	cellular component	39.7	0.002
catalytic activity	Hs	molecular function	377	4.31e-127
protein binding	Hs	molecular function	39.7	0.002
GTP binding	Hs	molecular function	377	4.31e-127
nucleus	Hs	cellular component	377	4.31e-127
mitochondrion	Hs	cellular component	39.7	0.002
mitochondrial outer membrane	Hs	cellular component	39.7	0.002
mitochondrial inner membrane	Hs	cellular component	39.7	0.002
endoplasmic reticulum	Hs	cellular component	39.7	0.002
endoplasmic reticulum membrane	Hs	cellular component	39.7	0.002
Golgi apparatus	Hs	cellular component	39.7	0.002
lipid droplet	Hs	cellular component	39.7	0.002
cytosol	Hs	cellular component	377	4.31e-127
membrane	Hs	cellular component	39.7	0.002
lyase activity	Hs	molecular function	377	4.31e-127
molybdopterin synthase complex	Hs	cellular component	377	4.31e-127
protein self-association	Hs	molecular function	39.7	0.002
metal ion binding	Hs	molecular function	377	4.31e-127
iron-sulfur cluster binding	Hs	molecular function	377	4.31e-127
4 iron, 4 sulfur cluster binding	Hs	molecular function	377	4.31e-127
GTP 3',8'-cyclase activity	Hs	molecular function	377	4.31e-127
cyclic pyranopterin monophosphate synthase activity	Hs	molecular function	377	4.31e-127

GO (InterProScan)

12 results

GO Term	Analysis	Type	e-value
catalytic activity	SFLD	molecular function	0.0
Mo-molybdopterin cofactor biosynthetic process	TIGRFAM	biological process	2.4E-97
molybdopterin synthase complex	Pfam	cellular component	3.0E-23
metal ion binding	TIGRFAM	molecular function	2.4E-97
iron-sulfur cluster binding	SFLD	molecular function	0.0
4 iron, 4 sulfur cluster binding	ProSitePatterns	molecular function
nucleic acid binding	SUPERFAMILY	molecular function	5.24E-16
RNA binding	Pfam	molecular function	3.0E-18
structural constituent of ribosome	Pfam	molecular function	3.0E-18
intracellular	Pfam	cellular component	3.0E-18
ribosome	Pfam	cellular component	3.0E-18
translation	Pfam	biological process	3.0E-18

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