Aniseed - Gene card

Gene 'Phmamm.CG.MTP2014.S2...'

Gene Card

Best human hits

ZNF625; ZNF782; ZNF79

Species

P.mammillata

Unique Gene ID

Phmamm.g00006799

Gene Model ID

Phmamm.CG.MTP2014.S292.g06799

Location

S292:25343..29811

Transcript Models and Sequences

Phmamm.CG.MTP2014.S292.g06799.01.t
Phmamm.CG.MTP2014.S292.g06799.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

35 results

AHC0AAA98YF05

Plate: Plate_98_F05

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
Znf_C2H2_sf	SUPERFAMILY	Zinc finger C2H2 superfamily
Znf_C2H2_type	Pfam	Zinc finger C2H2-type
Znf_C2H2_type	ProSitePatterns	Zinc finger C2H2-type
Znf_C2H2_type	ProSiteProfiles	Zinc finger C2H2-type
Znf_C2H2_type	SMART	Zinc finger C2H2-type
SKP1/BTB/POZ_sf	SUPERFAMILY	SKP1/BTB/POZ domain superfamily
BTB/POZ_dom	Pfam	BTB/POZ domain

GOSlim

7 results

GO Term	Annotation Origin	Type
nucleic acid binding	Blast	molecular function
DNA binding	Blast	molecular function
transcription factor activity, sequence-specific DNA binding	Blast	molecular function
protein binding	Blast	molecular function
intracellular	Blast	cellular component
nucleus	Blast	cellular component
metal ion binding	Blast	molecular function

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

7 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleic acid binding	Hs	molecular function	138	7.01e-37
DNA binding	Hs	molecular function	138	7.01e-37
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	138	2.55e-36
protein binding	Hs	molecular function	138	7.01e-37
intracellular	Hs	cellular component	138	7.01e-37
nucleus	Hs	cellular component	138	7.01e-37
metal ion binding	Hs	molecular function	138	7.01e-37

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
nucleic acid binding	Pfam	molecular function	6.5E-5
protein binding	Pfam	molecular function	1.7E-8