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  1. Gene 'Haaura.CG.MTP2014.S2...'

Gene Card

Best human hits

ACTB; ACTC1; ACTG1

Species

P.mammillata

Unique Gene ID

Phmamm.g00007316

Gene Model ID

Phmamm.CG.MTP2014.S327.g07316

Location

S327:149080..150629

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S327.g07316.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

67 results

AHC0AAA10YD08

Plate: Plate_10_D08

AHC0AAA14YA23

Plate: Plate_14_A23

AHC0AAA15YL06

Plate: Plate_15_L06

AHC0AAA17YA24

Plate: Plate_17_A24

AHC0AAA26YG08

Plate: Plate_26_G08

AHC0AAA8YP15

Plate: Plate_8_P15

AHC0AAA30YI20

Plate: Plate_30_I20

AHC0AAA31YF17

Plate: Plate_31_F17

AHC0AAA35YC19

Plate: Plate_35_C19

AHC0AAA40YI18

Plate: Plate_40_I18

AHC0AAA43YF09

Plate: Plate_43_F09

AHC0AAA54YB19

Plate: Plate_54_B19

AHC0AAA60YL17

Plate: Plate_60_L17

AHC0AAA61YD06

Plate: Plate_61_D06

AHC0AAA64YE14

Plate: Plate_64_E14

AHC0AAA67YM09

Plate: Plate_67_M09

AHC0AAA77YF04

Plate: Plate_77_F04

AHC0AAA80YD15

Plate: Plate_80_D15

AHC0AAA104YM21

Plate: Plate_104_M21

AHC0AAA117YA19

Plate: Plate_117_A19

AHC0AAA120YA16

Plate: Plate_120_A16

AHC0AAA120YG20

Plate: Plate_120_G20

AHC0AAA124YC16

Plate: Plate_124_C16

AHC0AAA126YO24

Plate: Plate_126_O24

AHC0AAA129YE16

Plate: Plate_129_E16

AHC0AAA130YF02

Plate: Plate_130_F02

AHC0AAA139YK11

Plate: Plate_139_K11

AHC0AAA144YO24

Plate: Plate_144_O24

AHC0AAA145YA23

Plate: Plate_145_A23

AHC0AAA146YE04

Plate: Plate_146_E04

AHC0AAA148YL11

Plate: Plate_148_L11

AHC0AAA150YG14

Plate: Plate_150_G14

AHC0AAA82YD18

Plate: Plate_82_D18

AHC0AAA87YO15

Plate: Plate_87_O15

AHC0AAA93YJ19

Plate: Plate_93_J19

AHC0AAA160YN16

Plate: Plate_160_N16

AHC0AAA178YG21

Plate: Plate_178_G21

AHC0AAA178YK01

Plate: Plate_178_K01

AHC0AAA180YL08

Plate: Plate_180_L08

AHC0AAA183YG01

Plate: Plate_183_G01

AHC0AAA183YG06

Plate: Plate_183_G06

AHC0AAA189YN15

Plate: Plate_189_N15

AHC0AAA192YB23

Plate: Plate_192_B23

AHC0AAA193YD11

Plate: Plate_193_D11

AHC0AAA197YN11

Plate: Plate_197_N11

AHC0AAA197YP13

Plate: Plate_197_P13

AHC0AAA201YL15

Plate: Plate_201_L15

AHC0AAA206YB12

Plate: Plate_206_B12

AHC0AAA211YN23

Plate: Plate_211_N23

AHC0AAA213YE21

Plate: Plate_213_E21

AHC0AAA214YH23

Plate: Plate_214_H23

AHC0AAA215YE21

Plate: Plate_215_E21

AHC0AAA219YM12

Plate: Plate_219_M12

AHC0AAA222YE07

Plate: Plate_222_E07

AHC0AAA225YO04

Plate: Plate_225_O04

AHC0AAA231YH03

Plate: Plate_231_H03

AHC0AAA232YM01

Plate: Plate_232_M01

AHC0AAA240YK13

Plate: Plate_240_K13

AHC0AAA241YF15

Plate: Plate_241_F15

AHC0AAA242YH13

Plate: Plate_242_H13

AHC0AAA243YO22

Plate: Plate_243_O22

AHC0AAA245YG21

Plate: Plate_245_G21

AHC0AAA245YO16

Plate: Plate_245_O16

AHC0AAA250YC18

Plate: Plate_250_C18

AHC0AAA254YA11

Plate: Plate_254_A11

AHC0AAA263YD16

Plate: Plate_263_D16

AHC0AAA54YB17

Plate: Plate_54_B17

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Actin PANTHER Actin family
Actin PRINTS Actin family
Actin_CS ProSitePatterns Actin, conserved site
Actin/actin-like_CS ProSitePatterns Actin/actin-like conserved site
Actin SMART Actin family
Actin Pfam Actin family

GOSlim

41 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
extracellular space Blast cellular component
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
cytosol Blast cellular component
cytoskeleton Blast cellular component
plasma membrane Blast cellular component
focal adhesion Blast cellular component
membrane Blast cellular component
protein kinase binding Blast molecular function
lamellipodium Blast cellular component
ubiquitin protein ligase binding Blast molecular function
vesicle Blast cellular component
macromolecular complex Blast cellular component
identical protein binding Blast molecular function
myelin sheath Blast cellular component
cell body Blast cellular component
extracellular exosome Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
nuclear lumen Blast cellular component
RNA polymerase II regulatory region sequence-specific DNA binding Blast molecular function
organelle organization Blast biological process
structural molecule activity Blast molecular function
cytoskeletal part Blast cellular component
nucleoside-triphosphatase activity Blast molecular function
cytoskeletal protein binding Blast molecular function
cytoplasmic part Blast cellular component
organelle part Blast cellular component
plasma membrane region Blast cellular component
cell projection Blast cellular component
transcription factor binding Blast molecular function
chromatin binding Blast molecular function
macromolecular complex binding Blast molecular function
DNA binding Blast molecular function
nucleoplasm part Blast cellular component
cytoplasmic vesicle Blast cellular component
enzyme binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

47 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 740 0.0
nuclear chromatin Hs cellular component 740 0.0
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 740 0.0
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function 740 0.0
structural constituent of cytoskeleton Hs molecular function 740 0.0
protein binding Hs molecular function 740 0.0
profilin binding Hs molecular function 739 0.0
ATP binding Hs molecular function 740 0.0
extracellular space Hs cellular component 740 0.0
nucleus Hs cellular component 740 0.0
nucleoplasm Hs cellular component 740 0.0
cytoplasm Hs cellular component 740 0.0
cytosol Hs cellular component 740 0.0
cytoskeleton Hs cellular component 740 0.0
actin filament Hs cellular component 739 0.0
plasma membrane Hs cellular component 740 0.0
focal adhesion Hs cellular component 740 0.0
actin cytoskeleton Hs cellular component 740 0.0
membrane Hs cellular component 740 0.0
ATPase activity Hs molecular function 722 0.0
myosin binding Hs molecular function 722 0.0
kinesin binding Hs molecular function 740 0.0
protein kinase binding Hs molecular function 740 0.0
myofibril Hs cellular component 739 0.0
sarcomere Hs cellular component 722 0.0
lamellipodium Hs cellular component 722 0.0
filopodium Hs cellular component 722 0.0
intracellular ribonucleoprotein complex Hs cellular component 740 0.0
Tat protein binding Hs molecular function 740 0.0
nucleosomal DNA binding Hs molecular function 740 0.0
ubiquitin protein ligase binding Hs molecular function 739 0.0
I band Hs cellular component 722 0.0
filamentous actin Hs cellular component 739 0.0
vesicle Hs cellular component 740 0.0
macromolecular complex Hs cellular component 740 0.0
NuA4 histone acetyltransferase complex Hs cellular component 740 0.0
cytoplasmic ribonucleoprotein granule Hs cellular component 740 0.0
actomyosin, actin portion Hs cellular component 722 0.0
identical protein binding Hs molecular function 740 0.0
myelin sheath Hs cellular component 739 0.0
cell body Hs cellular component 722 0.0
phagocytic vesicle Hs cellular component 739 0.0
nitric-oxide synthase binding Hs molecular function 740 0.0
extracellular exosome Hs cellular component 740 0.0
blood microparticle Hs cellular component 740 0.0
dense body Hs cellular component 740 0.0
structural constituent of postsynaptic actin cytoskeleton Hs molecular function 740 0.0

GO (InterProScan)

No result

GO Term Analysis Type e-value