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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S3...'

Gene Card

Best human hits

CARF

Species

P.mammillata

Unique Gene ID

Phmamm.g00007770

Gene Model ID

Phmamm.CG.MTP2014.S360.g07770

Location

S360:13108..14441

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S360.g07770.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

4 results

AHC0AAA20YK14

Plate: Plate_20_K14

AHC0AAA92YD02

Plate: Plate_92_D02

AHC0AAA209YJ17

Plate: Plate_209_J17

AHC0AAA92YF04

Plate: Plate_92_F04

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term Analysis Definition
CaRF Pfam Calcium-responsive transcription factor

GOSlim

6 results

GO Term Annotation Origin Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding Blast molecular function
DNA binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
nucleolus Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 63.2 1.23e-10
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 63.2 1.23e-10
DNA binding Hs molecular function 63.2 1.23e-10
transcription factor activity, sequence-specific DNA binding Hs molecular function 63.2 1.23e-10
nucleus Hs cellular component 63.2 1.23e-10
nucleoplasm Hs cellular component 63.2 1.23e-10
nucleolus Hs cellular component 63.2 1.23e-10

GO (InterProScan)

No result

GO Term Analysis Type e-value