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Gene Card

Best human hits

CCT8; CCT8L2; TCP1

Species

P.mammillata

Unique Gene ID

Phmamm.g00007970

Gene Model ID

Phmamm.CG.MTP2014.S374.g07970

Location

S374:139246..143161

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S374.g07970.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

19 results

AHC0AAA19YG06

Plate: Plate_19_G06

AHC0AAA24YF01

Plate: Plate_24_F01

AHC0AAA7YL01

Plate: Plate_7_L01

AHC0AAA71YE11

Plate: Plate_71_E11

AHC0AAA102YC17

Plate: Plate_102_C17

AHC0AAA106YH11

Plate: Plate_106_H11

AHC0AAA133YE10

Plate: Plate_133_E10

AHC0AAA84YP20

Plate: Plate_84_P20

AHC0AAA85YN21

Plate: Plate_85_N21

AHC0AAA92YE01

Plate: Plate_92_E01

AHC0AAA95YC10

Plate: Plate_95_C10

AHC0AAA106YH09

Plate: Plate_106_H09

AHC0AAA133YG12

Plate: Plate_133_G12

AHC0AAA160YD23

Plate: Plate_160_D23

AHC0AAA205YG21

Plate: Plate_205_G21

AHC0AAA210YO07

Plate: Plate_210_O07

AHC0AAA211YL24

Plate: Plate_211_L24

AHC0AAA235YL06

Plate: Plate_235_L06

AHC0AAA92YG03

Plate: Plate_92_G03

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
GroEL-like_apical_dom_sf Gene3D GroEL-like apical domain superfamily
Chaperonin_TCP-1_CS ProSitePatterns Chaperonin TCP-1, conserved site
GroEL-like_apical_dom_sf SUPERFAMILY GroEL-like apical domain superfamily
Cpn60/TCP-1 Pfam Chaperonin Cpn60/TCP-1 family
Chap_CCT_theta TIGRFAM T-complex protein 1, theta subunit
GROEL-like_equatorial_sf Gene3D GroEL-like equatorial domain superfamily
GROEL-like_equatorial_sf SUPERFAMILY GroEL-like equatorial domain superfamily
Chaperone_TCP-1 PRINTS Chaperone tailless complex polypeptide 1 (TCP-1)
TCP-1-like_intermed_sf SUPERFAMILY TCP-1-like chaperonin intermediate domain superfamily

GOSlim

42 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
RNA binding Blast molecular function
protein binding Orthology molecular function
ATP binding Orthology molecular function
extracellular region Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
Golgi apparatus Blast cellular component
centrosome Orthology cellular component
microtubule organizing center Orthology cellular component
cytosol Orthology cellular component
cytoskeleton Orthology cellular component
microtubule Orthology cellular component
protein folding Orthology biological process
ubiquitin protein ligase binding Blast molecular function
cell projection Orthology cellular component
myelin sheath Blast cellular component
cell body Orthology cellular component
unfolded protein binding Orthology molecular function
extracellular exosome Orthology cellular component
macromolecular complex Orthology cellular component
organelle Orthology cellular component
plasma membrane region Orthology cellular component
sexual reproduction Orthology biological process
cellular process Orthology biological process
organelle organization Orthology biological process
DNA metabolic process Orthology biological process
transferase activity, transferring phosphorus-containing groups Orthology molecular function
intracellular organelle part Orthology cellular component
cytoplasmic vesicle Orthology cellular component
endomembrane system Orthology cellular component
intracellular organelle lumen Orthology cellular component
lysosome Orthology cellular component
vacuolar part Orthology cellular component
nucleoside-triphosphatase activity Orthology molecular function
cell adhesion molecule binding Orthology molecular function
intracellular non-membrane-bounded organelle Blast cellular component
ion transport Blast biological process
transmembrane transport Blast biological process
nuclear lumen Blast cellular component
metal ion transport Blast biological process
monovalent inorganic cation transport Blast biological process

GO (Orthology)

34 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
nucleotide binding Hs molecular function
zona pellucida receptor complex Hs cellular component
protein binding Hs molecular function
ATP binding Hs molecular function
extracellular region Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
centrosome Hs cellular component
microtubule organizing center Hs cellular component
cytosol Hs cellular component
chaperonin-containing T-complex Hs cellular component
cytoskeleton Hs cellular component
microtubule Hs cellular component
cilium Hs cellular component
protein folding Hs biological process
'de novo' protein folding Hs biological process
binding of sperm to zona pellucida Hs biological process
positive regulation of telomere maintenance via telomerase Hs biological process
secretory granule lumen Hs cellular component
azurophil granule lumen Hs cellular component
ATPase activity, coupled Hs molecular function
cell projection Hs cellular component
protein binding involved in protein folding Hs molecular function
cell body Hs cellular component
intermediate filament cytoskeleton Hs cellular component
cadherin binding Hs molecular function
pore complex assembly Hs biological process
protein stabilization Hs biological process
unfolded protein binding Hs molecular function
chaperone-mediated protein folding Hs biological process
extracellular exosome Hs cellular component
toxin transport Hs biological process
ficolin-1-rich granule lumen Hs cellular component
positive regulation of telomerase RNA localization to Cajal body Hs biological process

GO (Blast)

35 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 475 2.44e-164
pericentriolar material Hs cellular component 146 2.54e-38
heterochromatin Hs cellular component 146 2.54e-38
acrosomal vesicle Hs cellular component 146 2.54e-38
zona pellucida receptor complex Hs cellular component 475 2.44e-164
RNA binding Hs molecular function 146 2.54e-38
anion channel activity Hs molecular function 144 1.14e-37
protein binding Hs molecular function 475 2.44e-164
ATP binding Hs molecular function 475 2.44e-164
extracellular region Hs cellular component 475 2.44e-164
nucleoplasm Hs cellular component 475 2.44e-164
nuclear heterochromatin Hs cellular component 146 2.54e-38
cytoplasm Hs cellular component 475 2.44e-164
Golgi apparatus Hs cellular component 146 2.54e-38
centrosome Hs cellular component 475 2.44e-164
microtubule organizing center Hs cellular component 475 2.44e-164
cytosol Hs cellular component 475 2.44e-164
chaperonin-containing T-complex Hs cellular component 475 2.44e-164
cytoskeleton Hs cellular component 475 2.44e-164
microtubule Hs cellular component 475 2.44e-164
cilium Hs cellular component 475 2.44e-164
calcium-activated potassium channel activity Hs molecular function 144 1.14e-37
ubiquitin protein ligase binding Hs molecular function 146 2.54e-38
secretory granule lumen Hs cellular component 475 2.44e-164
azurophil granule lumen Hs cellular component 475 2.44e-164
ATPase activity, coupled Hs molecular function 475 2.44e-164
cell projection Hs cellular component 475 2.44e-164
myelin sheath Hs cellular component 146 2.54e-38
protein binding involved in protein folding Hs molecular function 475 2.44e-164
cell body Hs cellular component 475 2.44e-164
intermediate filament cytoskeleton Hs cellular component 475 2.44e-164
cadherin binding Hs molecular function 475 2.44e-164
unfolded protein binding Hs molecular function 475 2.44e-164
extracellular exosome Hs cellular component 475 2.44e-164
ficolin-1-rich granule lumen Hs cellular component 475 2.44e-164

GO (InterProScan)

3 results

GO Term Analysis Type e-value
ATP binding TIGRFAM molecular function 8.0E-144
protein folding TIGRFAM biological process 8.0E-144
unfolded protein binding TIGRFAM molecular function 8.0E-144

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