Gene Card
Best human hits
DDX58; DHX58; IFIH1
Species
Unique Gene ID
Phmamm.g00008489
Gene Model ID
Phmamm.CG.MTP2014.S418.g08489
Location
S418:3069..17045
Transcript Models and Sequences
Genoscope Yasuo Villefranche
1 result
AHC0AAA224YK03
Plate: Plate_224_K03
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
7 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Helicase/UvrB_N | Pfam | Helicase/UvrB, N-terminal |
| P-loop_NTPase | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolase |
| RLR_C_sf | Gene3D | RIG-I-like receptor, C-terminal domain superfamily |
| RLR_CTR | ProSiteProfiles | RIG-I-like receptor, C-terminal regulatory domain |
| Helicase_ATP-bd | ProSiteProfiles | Helicase superfamily 1/2, ATP-binding domain |
| RLR_CTR | Pfam | RIG-I-like receptor, C-terminal regulatory domain |
| Helicase_ATP-bd | SMART | Helicase superfamily 1/2, ATP-binding domain |
GOSlim
24 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nucleotide binding | Blast | molecular function |
| nucleic acid binding | Blast | molecular function |
| DNA binding | Blast | molecular function |
| double-stranded DNA binding | Blast | molecular function |
| RNA binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| ATP binding | Blast | molecular function |
| nucleus | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| cytosol | Blast | cellular component |
| cytoskeleton | Blast | cellular component |
| plasma membrane | Blast | cellular component |
| zinc ion binding | Blast | molecular function |
| membrane | Blast | cellular component |
| hydrolase activity | Blast | molecular function |
| cell junction | Blast | cellular component |
| ubiquitin protein ligase binding | Blast | molecular function |
| identical protein binding | Blast | molecular function |
| cell projection | Blast | cellular component |
| metal ion binding | Blast | molecular function |
| nucleoside-triphosphatase activity | Blast | molecular function |
| cell projection membrane | Blast | cellular component |
| cell leading edge | Blast | cellular component |
| macromolecular complex binding | Blast | molecular function |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
27 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleotide binding | Hs | molecular function | 235 | 1.72e-65 |
| nucleic acid binding | Hs | molecular function | 235 | 1.72e-65 |
| DNA binding | Hs | molecular function | 191 | 1.97e-51 |
| double-stranded DNA binding | Hs | molecular function | 235 | 1.72e-65 |
| RNA binding | Hs | molecular function | 235 | 1.72e-65 |
| double-stranded RNA binding | Hs | molecular function | 235 | 1.72e-65 |
| single-stranded RNA binding | Hs | molecular function | 235 | 1.72e-65 |
| helicase activity | Hs | molecular function | 235 | 1.72e-65 |
| protein binding | Hs | molecular function | 235 | 1.72e-65 |
| ATP binding | Hs | molecular function | 235 | 1.72e-65 |
| nucleus | Hs | cellular component | 160 | 2.08e-40 |
| cytoplasm | Hs | cellular component | 235 | 1.72e-65 |
| cytosol | Hs | cellular component | 235 | 1.72e-65 |
| cytoskeleton | Hs | cellular component | 235 | 1.72e-65 |
| plasma membrane | Hs | cellular component | 235 | 1.72e-65 |
| bicellular tight junction | Hs | cellular component | 235 | 1.72e-65 |
| zinc ion binding | Hs | molecular function | 235 | 1.72e-65 |
| actin cytoskeleton | Hs | cellular component | 235 | 1.72e-65 |
| membrane | Hs | cellular component | 235 | 1.72e-65 |
| hydrolase activity | Hs | molecular function | 235 | 1.72e-65 |
| cell junction | Hs | cellular component | 235 | 1.72e-65 |
| ubiquitin protein ligase binding | Hs | molecular function | 235 | 1.72e-65 |
| ruffle membrane | Hs | cellular component | 235 | 1.72e-65 |
| identical protein binding | Hs | molecular function | 235 | 1.72e-65 |
| cell projection | Hs | cellular component | 235 | 1.72e-65 |
| ribonucleoprotein complex binding | Hs | molecular function | 160 | 2.08e-40 |
| metal ion binding | Hs | molecular function | 235 | 1.72e-65 |
GO (InterProScan)
3 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| DNA binding | Pfam | molecular function | 1.2E-20 |
| ATP binding | Pfam | molecular function | 1.2E-20 |
| hydrolase activity | Pfam | molecular function | 1.2E-20 |
