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Gene Card

Best human hits

TUBA1B; TUBA3C; TUBA3D

Species

P.mammillata

Unique Gene ID

Phmamm.g00008491

Gene Model ID

Phmamm.CG.MTP2014.S418.g08491

Location

S418:23694..25491

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S418.g08491.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

38 results

AHC0AAA26YI17

Plate: Plate_26_I17

AHC0AAA30YF11

Plate: Plate_30_F11

AHC0AAA34YI01

Plate: Plate_34_I01

AHC0AAA45YM02

Plate: Plate_45_M02

AHC0AAA51YI08

Plate: Plate_51_I08

AHC0AAA58YF14

Plate: Plate_58_F14

AHC0AAA59YE08

Plate: Plate_59_E08

AHC0AAA59YH15

Plate: Plate_59_H15

AHC0AAA65YO05

Plate: Plate_65_O05

AHC0AAA76YP13

Plate: Plate_76_P13

AHC0AAA80YE13

Plate: Plate_80_E13

AHC0AAA80YP03

Plate: Plate_80_P03

AHC0AAA113YK08

Plate: Plate_113_K08

AHC0AAA133YH08

Plate: Plate_133_H08

AHC0AAA133YK02

Plate: Plate_133_K02

AHC0AAA141YL19

Plate: Plate_141_L19

AHC0AAA143YF19

Plate: Plate_143_F19

AHC0AAA146YO22

Plate: Plate_146_O22

AHC0AAA93YK17

Plate: Plate_93_K17

AHC0AAA97YM06

Plate: Plate_97_M06

AHC0AAA133YH06

Plate: Plate_133_H06

AHC0AAA133YM04

Plate: Plate_133_M04

AHC0AAA163YE03

Plate: Plate_163_E03

AHC0AAA165YA09

Plate: Plate_165_A09

AHC0AAA188YJ20

Plate: Plate_188_J20

AHC0AAA196YO22

Plate: Plate_196_O22

AHC0AAA198YD07

Plate: Plate_198_D07

AHC0AAA200YE12

Plate: Plate_200_E12

AHC0AAA200YN07

Plate: Plate_200_N07

AHC0AAA206YB09

Plate: Plate_206_B09

AHC0AAA206YK20

Plate: Plate_206_K20

AHC0AAA220YD14

Plate: Plate_220_D14

AHC0AAA221YO08

Plate: Plate_221_O08

AHC0AAA224YB14

Plate: Plate_224_B14

AHC0AAA228YJ16

Plate: Plate_228_J16

AHC0AAA230YE08

Plate: Plate_230_E08

AHC0AAA234YF11

Plate: Plate_234_F11

AHC0AAA241YO19

Plate: Plate_241_O19

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

13 results

IPR Term Analysis Definition
Tubulin_FtsZ_GTPase SMART Tubulin/FtsZ, GTPase domain
Tubulin/FtsZ_2-layer-sand-dom SMART Tubulin/FtsZ, 2-layer sandwich domain
Tubulin/FtsZ_C_sf Gene3D Tubulin/FtsZ, C-terminal domain superfamily
Tub_FtsZ_C SUPERFAMILY Tubulin/FtsZ, C-terminal
Tubulin PANTHER Tubulin
Tubulin/FtsZ_GTPase_sf SUPERFAMILY Tubulin/FtsZ, GTPase domain superfamily
Tubulin/FtsZ_2-layer-sand-dom Pfam Tubulin/FtsZ, 2-layer sandwich domain
Tubulin/FtsZ_GTPase_sf Gene3D Tubulin/FtsZ, GTPase domain superfamily
Tubulin_FtsZ_GTPase Pfam Tubulin/FtsZ, GTPase domain
Tubulin PRINTS Tubulin
Tubulin_CS ProSitePatterns Tubulin, conserved site
Alpha_tubulin PRINTS Alpha tubulin
Tubulin_C Gene3D Tubulin, C-terminal

GOSlim

18 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
GTPase activity Blast molecular function
structural molecule activity Blast molecular function
protein binding Blast molecular function
GTP binding Blast molecular function
nucleus Blast cellular component
cytoplasm Blast cellular component
cytoskeleton Blast cellular component
microtubule Blast cellular component
microtubule-based process InterProScan biological process
microtubule cytoskeleton Blast cellular component
ubiquitin protein ligase binding Blast molecular function
myelin sheath Blast cellular component
membrane raft Blast cellular component
extracellular exosome Blast cellular component
RNA binding Blast molecular function
organelle organization Blast biological process
cytoplasmic part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 796 0.0
double-stranded RNA binding Hs molecular function 793 0.0
GTPase activity Hs molecular function 796 0.0
structural molecule activity Hs molecular function 793 0.0
structural constituent of cytoskeleton Hs molecular function 796 0.0
protein binding Hs molecular function 796 0.0
GTP binding Hs molecular function 796 0.0
nucleus Hs cellular component 796 0.0
cytoplasm Hs cellular component 796 0.0
cytoskeleton Hs cellular component 796 0.0
microtubule Hs cellular component 796 0.0
cytoplasmic microtubule Hs cellular component 793 0.0
microtubule cytoskeleton Hs cellular component 796 0.0
ubiquitin protein ligase binding Hs molecular function 793 0.0
myelin sheath Hs cellular component 793 0.0
membrane raft Hs cellular component 793 0.0
extracellular exosome Hs cellular component 793 0.0

GO (InterProScan)

5 results

GO Term Analysis Type e-value
GTPase activity SMART molecular function 2.7E-83
structural constituent of cytoskeleton PRINTS molecular function 6.2E-108
GTP binding PRINTS molecular function 6.2E-108
microtubule PANTHER cellular component 8.0E-287
microtubule-based process PANTHER biological process 8.0E-287

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