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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S6...'

Gene Card

Best human hits

RABGAP1; TBC1D1; TBC1D4

Species

P.mammillata

Unique Gene ID

Phmamm.g00010461

Gene Model ID

Phmamm.CG.MTP2014.S601.g10461

Location

S601:30144..45627

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S601.g10461.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

2 results

AHC0AAA96YH07

Plate: Plate_96_H07

AHC0AAA268YK08

Plate: Plate_268_K08

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Rab-GTPase-TBC_dom SMART Rab-GTPase-TBC domain
Rab-GTPase_TBC_sf SUPERFAMILY Rab-GTPase-TBC domain superfamily
Rab-GTPase-TBC_dom ProSiteProfiles Rab-GTPase-TBC domain
Rab-GTPase-TBC_dom Pfam Rab-GTPase-TBC domain

GOSlim

30 results

GO Term Annotation Origin Type
signal transducer activity Blast molecular function
G-protein coupled receptor activity Blast molecular function
GTPase activator activity Orthology molecular function
protein binding Orthology molecular function
intracellular Orthology cellular component
nucleus Orthology cellular component
cytoplasm Orthology cellular component
centrosome Blast cellular component
microtubule organizing center Blast cellular component
cytosol Orthology cellular component
cytoskeleton Blast cellular component
intracellular protein transport Orthology biological process
endomembrane system Orthology cellular component
tubulin binding Blast molecular function
membrane Blast cellular component
integral component of membrane Blast cellular component
vesicle Orthology cellular component
positive regulation of GTPase activity Orthology biological process
membrane organization Orthology biological process
extracellular exosome Orthology cellular component
enzyme binding Orthology molecular function
intracellular organelle part Orthology cellular component
organelle membrane Orthology cellular component
cytoplasmic vesicle Orthology cellular component
organelle organization Orthology biological process
cellular response to organic substance Orthology biological process
protein localization Orthology biological process
cytoskeletal part Blast cellular component
macromolecular complex Blast cellular component
microtubule cytoskeleton Blast cellular component

GO (Orthology)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
GTPase activator activity Hs molecular function
protein binding Hs molecular function
intracellular Hs cellular component
nucleus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
intracellular protein transport Hs biological process
endomembrane system Hs cellular component
vesicle-mediated transport Hs biological process
Rab GTPase binding Hs molecular function
cytoplasmic vesicle membrane Hs cellular component
regulation of vesicle fusion Hs biological process
vesicle Hs cellular component
cellular response to insulin stimulus Hs biological process
regulation of protein localization Hs biological process
membrane organization Hs biological process
extracellular exosome Hs cellular component
activation of GTPase activity Hs biological process

GO (Blast)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
signal transducer activity Hs molecular function 171 4.74e-43
G-protein coupled receptor activity Hs molecular function 171 4.74e-43
GTPase activator activity Hs molecular function 377 8.86e-111
protein binding Hs molecular function 377 8.86e-111
intracellular Hs cellular component 377 8.86e-111
nucleus Hs cellular component 377 8.86e-111
cytoplasm Hs cellular component 362 5.11e-105
centrosome Hs cellular component 171 4.74e-43
microtubule organizing center Hs cellular component 171 4.74e-43
cytosol Hs cellular component 377 8.86e-111
cytoskeleton Hs cellular component 171 4.74e-43
microtubule associated complex Hs cellular component 171 4.74e-43
endomembrane system Hs cellular component 377 8.86e-111
tubulin binding Hs molecular function 171 4.74e-43
membrane Hs cellular component 171 4.74e-43
integral component of membrane Hs cellular component 171 4.74e-43
Rab GTPase binding Hs molecular function 377 8.86e-111
cytoplasmic vesicle membrane Hs cellular component 362 5.11e-105
vesicle Hs cellular component 362 5.11e-105
extracellular exosome Hs cellular component 362 5.11e-105

GO (InterProScan)

No result

GO Term Analysis Type e-value