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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S6...'

Gene Card

Best human hits

RCN2; RCN3; SDF4

Species

P.mammillata

Unique Gene ID

Phmamm.g00010575

Gene Model ID

Phmamm.CG.MTP2014.S614.g10575

Location

S614:67088..71609

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S614.g10575.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

3 results

AHC0AAA9YG13

Plate: Plate_9_G13

AHC0AAA244YG12

Plate: Plate_244_G12

AHC0AAA253YC13

Plate: Plate_253_C13

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
EF_hand_dom Pfam EF-hand domain
EF_hand_dom ProSiteProfiles EF-hand domain
EF_Hand_1_Ca_BS ProSitePatterns EF-Hand 1, calcium-binding site
EF_hand_dom SMART EF-hand domain
EF-hand-dom_pair SUPERFAMILY EF-hand domain pair

GOSlim

22 results

GO Term Annotation Origin Type
calcium ion binding Orthology molecular function
protein binding Blast molecular function
nucleolus Blast cellular component
cytoplasm Orthology cellular component
endoplasmic reticulum Blast cellular component
endoplasmic reticulum lumen Blast cellular component
Golgi apparatus Orthology cellular component
plasma membrane Orthology cellular component
membrane Orthology cellular component
identical protein binding Orthology molecular function
cell projection Orthology cellular component
metal ion binding Orthology molecular function
extracellular exosome Orthology cellular component
endosome Orthology cellular component
Golgi apparatus part Orthology cellular component
intracellular organelle lumen Orthology cellular component
membrane organization Orthology biological process
organelle organization Orthology biological process
brain development Orthology biological process
plasma membrane region Orthology cellular component
cell differentiation Orthology biological process
response to organic substance Orthology biological process

GO (Orthology)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
calcium ion binding Hs molecular function
cytoplasm Hs cellular component
late endosome Hs cellular component
Golgi apparatus Hs cellular component
Golgi lumen Hs cellular component
plasma membrane Hs cellular component
exocytosis Hs biological process
UV protection Hs biological process
membrane Hs cellular component
calcium ion regulated exocytosis Hs biological process
cerebellum development Hs biological process
bleb Hs cellular component
identical protein binding Hs molecular function
cell projection Hs cellular component
fat cell differentiation Hs biological process
response to ethanol Hs biological process
metal ion binding Hs molecular function
extracellular exosome Hs cellular component

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
calcium ion binding Hs molecular function 260 1.04e-84
protein binding Hs molecular function 107 9.19e-27
nucleolus Hs cellular component 107 9.19e-27
cytoplasm Hs cellular component 260 1.04e-84
late endosome Hs cellular component 260 1.04e-84
endoplasmic reticulum Hs cellular component 107 9.19e-27
endoplasmic reticulum lumen Hs cellular component 107 9.19e-27
Golgi apparatus Hs cellular component 260 1.04e-84
Golgi lumen Hs cellular component 260 1.04e-84
plasma membrane Hs cellular component 260 1.04e-84
membrane Hs cellular component 260 1.04e-84
bleb Hs cellular component 260 1.04e-84
identical protein binding Hs molecular function 260 1.04e-84
cell projection Hs cellular component 260 1.04e-84
metal ion binding Hs molecular function 260 1.04e-84
extracellular exosome Hs cellular component 260 1.04e-84

GO (InterProScan)

1 result

GO Term Analysis Type e-value
calcium ion binding Pfam molecular function 1.1E-7