Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

RDH12; RDH13; RDH14

Species

P.mammillata

Unique Gene ID

Phmamm.g00012385

Gene Model ID

Phmamm.CG.MTP2014.S854.g12385

Location

S854:66711..70932

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S854.g12385.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
NAD(P)-bd_dom_sf SUPERFAMILY NAD(P)-binding domain superfamily
SDR_fam PRINTS Short-chain dehydrogenase/reductase SDR
SDR_fam Pfam Short-chain dehydrogenase/reductase SDR

GOSlim

15 results

GO Term Annotation Origin Type
protein binding Blast molecular function
intracellular Blast cellular component
nucleus Blast cellular component
mitochondrion Blast cellular component
mitochondrial inner membrane Blast cellular component
lysosomal membrane Blast cellular component
endoplasmic reticulum Blast cellular component
endoplasmic reticulum membrane Blast cellular component
membrane Blast cellular component
oxidation-reduction process Blast biological process
catalytic activity Blast molecular function
organic substance metabolic process Blast biological process
cellular metabolic process Blast biological process
plasma membrane region Blast cellular component
neuron part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
retinol dehydrogenase activity Hs molecular function 91.3 2.44e-21
protein binding Hs molecular function 91.3 2.44e-21
intracellular Hs cellular component 91.3 2.44e-21
nucleus Hs cellular component 89.4 1.70e-20
mitochondrion Hs cellular component 89.4 1.70e-20
mitochondrial inner membrane Hs cellular component 82.0 7.55e-18
lysosomal membrane Hs cellular component 89.4 1.70e-20
endoplasmic reticulum Hs cellular component 89.4 1.70e-20
endoplasmic reticulum membrane Hs cellular component 89.4 1.70e-20
alcohol dehydrogenase (NADP+) activity Hs molecular function 89.4 1.70e-20
membrane Hs cellular component 89.4 1.70e-20
oxidoreductase activity Hs molecular function 91.3 2.44e-21
NADP-retinol dehydrogenase activity Hs molecular function 91.3 2.44e-21
photoreceptor inner segment membrane Hs cellular component 91.3 2.44e-21

GO (InterProScan)

No result

GO Term Analysis Type e-value