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GENE CARD

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Gene Card

Best human hits

AL139011.2; DCAF8; DCAF8L2

Species

P.mammillata

Unique Gene ID

Phmamm.g00013284

Gene Model ID

Phmamm.CG.MTP2014.S1017.g13284

Location

S1017:33118..41469

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S1017.g13284.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

19 results

AHC0AAA11YO18

Plate: Plate_11_O18

AHC0AAA40YK06

Plate: Plate_40_K06

AHC0AAA57YA12

Plate: Plate_57_A12

AHC0AAA67YD10

Plate: Plate_67_D10

AHC0AAA75YK13

Plate: Plate_75_K13

AHC0AAA77YL14

Plate: Plate_77_L14

AHC0AAA105YD04

Plate: Plate_105_D04

AHC0AAA119YG01

Plate: Plate_119_G01

AHC0AAA135YP09

Plate: Plate_135_P09

AHC0AAA149YO19

Plate: Plate_149_O19

AHC0AAA87YA21

Plate: Plate_87_A21

AHC0AAA92YD08

Plate: Plate_92_D08

AHC0AAA170YO05

Plate: Plate_170_O05

AHC0AAA177YA15

Plate: Plate_177_A15

AHC0AAA201YN04

Plate: Plate_201_N04

AHC0AAA225YH03

Plate: Plate_225_H03

AHC0AAA231YE24

Plate: Plate_231_E24

AHC0AAA251YO12

Plate: Plate_251_O12

AHC0AAA92YD06

Plate: Plate_92_D06

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
WD40_repeat SMART WD40 repeat
WD40_repeat ProSiteProfiles WD40 repeat
WD40_repeat Pfam WD40 repeat
WD40_repeat_dom ProSiteProfiles WD40-repeat-containing domain
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily

GOSlim

11 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
mitochondrion Orthology cellular component
peroxisome Orthology cellular component
cytosol Orthology cellular component
protein ubiquitination Orthology biological process
cellular protein modification process Orthology biological process
intracellular part Orthology cellular component
macromolecular complex Orthology cellular component

GO (Orthology)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
mitochondrion Hs cellular component
peroxisome Hs cellular component
cytosol Hs cellular component
protein ubiquitination Hs biological process
post-translational protein modification Hs biological process
Cul4-RING E3 ubiquitin ligase complex Hs cellular component

GO (Blast)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protein binding Hs molecular function 531 0.0
nucleus Hs cellular component 531 0.0
nucleoplasm Hs cellular component 531 0.0
cytoplasm Hs cellular component 531 0.0
mitochondrion Hs cellular component 531 0.0
peroxisome Hs cellular component 528 8.12e-179
cytosol Hs cellular component 531 0.0
Cul4-RING E3 ubiquitin ligase complex Hs cellular component 531 0.0

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Gene3D molecular function 3.0E-48