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GENE CARD

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Gene Card

Best human hits

INO80C; ZNHIT1

Species

P.mammillata

Unique Gene ID

Phmamm.g00013495

Gene Model ID

Phmamm.CG.MTP2014.S1063.g13495

Location

S1063:22334..23973

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S1063.g13495.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

21 results

AHC0AAA21YD14

Plate: Plate_21_D14

AHC0AAA24YO03

Plate: Plate_24_O03

AHC0AAA39YF23

Plate: Plate_39_F23

AHC0AAA40YF23

Plate: Plate_40_F23

AHC0AAA62YL07

Plate: Plate_62_L07

AHC0AAA68YM17

Plate: Plate_68_M17

AHC0AAA69YH16

Plate: Plate_69_H16

AHC0AAA70YM05

Plate: Plate_70_M05

AHC0AAA80YM02

Plate: Plate_80_M02

AHC0AAA129YI22

Plate: Plate_129_I22

AHC0AAA89YD04

Plate: Plate_89_D04

AHC0AAA174YB06

Plate: Plate_174_B06

AHC0AAA177YG08

Plate: Plate_177_G08

AHC0AAA178YO07

Plate: Plate_178_O07

AHC0AAA196YP15

Plate: Plate_196_P15

AHC0AAA197YO16

Plate: Plate_197_O16

AHC0AAA243YO05

Plate: Plate_243_O05

AHC0AAA251YE14

Plate: Plate_251_E14

AHC0AAA263YK13

Plate: Plate_263_K13

AHC0AAA267YP20

Plate: Plate_267_P20

AHC0AAA39YF21

Plate: Plate_39_F21

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
Znf_HIT Pfam Zinc finger, HIT-type
Znf_HIT ProSiteProfiles Zinc finger, HIT-type

GOSlim

15 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
metal ion binding Orthology molecular function
intracellular non-membrane-bounded organelle Orthology cellular component
nucleoplasm part Orthology cellular component
macromolecular complex Orthology cellular component
organelle organization Orthology biological process
regulation of cellular metabolic process Orthology biological process
cellular protein modification process Orthology biological process
chromatin binding Orthology molecular function
macromolecular complex binding Orthology molecular function
enzyme binding Orthology molecular function
nucleolus Blast cellular component
nuclear lumen Blast cellular component

GO (Orthology)

9 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
Swr1 complex Hs cellular component
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
regulation of histone deacetylation Hs biological process
nucleosome binding Hs molecular function
histone deacetylase binding Hs molecular function
histone exchange Hs biological process
metal ion binding Hs molecular function

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Swr1 complex Hs cellular component 158 4.08e-50
fibrillar center Hs cellular component 41.2 1.14e-04
protein binding Hs molecular function 158 4.08e-50
nucleus Hs cellular component 158 4.08e-50
nucleoplasm Hs cellular component 158 4.08e-50
Ino80 complex Hs cellular component 41.2 1.14e-04
nucleosome binding Hs molecular function 158 4.08e-50
histone deacetylase binding Hs molecular function 158 4.08e-50
metal ion binding Hs molecular function 158 4.08e-50
MLL1 complex Hs cellular component 41.2 1.14e-04

GO (InterProScan)

1 result

GO Term Analysis Type e-value
chromatin remodeling PANTHER biological process 6.3E-52