Gene Card
Best human hits
ABCF1; ABCF2; ABCF3
Species
Unique Gene ID
Phmamm.g00014211
Gene Model ID
Phmamm.CG.MTP2014.S1240.g14211
Location
S1240:11435..23220
Transcript Models and Sequences
Phmamm.CG.MTP2014.S1240.g14211.01.t
Phmamm.CG.MTP2014.S1240.g14211.02.t
Genoscope Yasuo Villefranche
15 results
AHC0AAA38YD17
Plate: Plate_38_D17
AHC0AAA43YE03
Plate: Plate_43_E03
AHC0AAA49YK21
Plate: Plate_49_K21
AHC0AAA126YM04
Plate: Plate_126_M04
AHC0AAA143YN17
Plate: Plate_143_N17
AHC0AAA143YP17
Plate: Plate_143_P17
AHC0AAA83YD13
Plate: Plate_83_D13
AHC0AAA165YD04
Plate: Plate_165_D04
AHC0AAA165YK16
Plate: Plate_165_K16
AHC0AAA203YC15
Plate: Plate_203_C15
AHC0AAA212YL13
Plate: Plate_212_L13
AHC0AAA220YC12
Plate: Plate_220_C12
AHC0AAA225YF01
Plate: Plate_225_F01
AHC0AAA251YP19
Plate: Plate_251_P19
AHC0AAA38YF19
Plate: Plate_38_F19
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
6 results
| IPR Term | Analysis | Definition |
|---|---|---|
| ABC_transporter-like | Pfam | ABC transporter-like |
| ABC_tran_Xtn | Pfam | ABC-transporter extension domain |
| ABC_transporter-like | ProSiteProfiles | ABC transporter-like |
| AAA+_ATPase | SMART | AAA+ ATPase domain |
| ABC_transporter_CS | ProSitePatterns | ABC transporter, conserved site |
| P-loop_NTPase | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolase |
GOSlim
18 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nucleotide binding | Orthology | molecular function |
| RNA binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| ATP binding | Orthology | molecular function |
| nucleus | Blast | cellular component |
| nuclear envelope | Blast | cellular component |
| nucleoplasm | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| mitochondrial envelope | Orthology | cellular component |
| cytosol | Blast | cellular component |
| ribosome | Blast | cellular component |
| membrane | Orthology | cellular component |
| nucleoside-triphosphatase activity | Orthology | molecular function |
| plasma membrane part | Orthology | cellular component |
| macromolecular complex | Orthology | cellular component |
| integral component of membrane | Orthology | cellular component |
| regulation of gene expression | Blast | biological process |
| cell adhesion molecule binding | Blast | molecular function |
GO (Orthology)
7 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| nucleotide binding | Hs | molecular function |
| transporter activity | Hs | molecular function |
| ATP binding | Hs | molecular function |
| mitochondrial envelope | Hs | cellular component |
| membrane | Hs | cellular component |
| ATPase activity | Hs | molecular function |
| ATP-binding cassette (ABC) transporter complex | Hs | cellular component |
GO (Blast)
17 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleotide binding | Hs | molecular function | 816 | 0.0 |
| RNA binding | Hs | molecular function | 366 | 1.22e-115 |
| transporter activity | Hs | molecular function | 816 | 0.0 |
| protein binding | Hs | molecular function | 417 | 6.67e-137 |
| ATP binding | Hs | molecular function | 816 | 0.0 |
| nucleus | Hs | cellular component | 366 | 1.22e-115 |
| nuclear envelope | Hs | cellular component | 366 | 1.22e-115 |
| nucleoplasm | Hs | cellular component | 366 | 1.22e-115 |
| cytoplasm | Hs | cellular component | 366 | 1.22e-115 |
| mitochondrial envelope | Hs | cellular component | 816 | 0.0 |
| cytosol | Hs | cellular component | 366 | 1.22e-115 |
| ribosome | Hs | cellular component | 366 | 1.22e-115 |
| translation factor activity, RNA binding | Hs | molecular function | 366 | 1.22e-115 |
| membrane | Hs | cellular component | 816 | 0.0 |
| ATPase activity | Hs | molecular function | 816 | 0.0 |
| ATP-binding cassette (ABC) transporter complex | Hs | cellular component | 816 | 0.0 |
| cadherin binding | Hs | molecular function | 417 | 6.67e-137 |
GO (InterProScan)
2 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| ATP binding | Pfam | molecular function | 1.9E-23 |
| ATPase activity | Pfam | molecular function | 1.9E-23 |
