Gene Card
Best human hits
SRSF4; SRSF5; SRSF6
Species
Unique Gene ID
Phmamm.g00014656
Gene Model ID
Phmamm.CG.MTP2014.S1385.g14656
Location
S1385:3908..5386
Transcript Models and Sequences
Phmamm.CG.MTP2014.S1385.g14656.01.t
Phmamm.CG.MTP2014.S1385.g14656.02.t
AHC0AAA18YK07
Plate: Plate_18_K07
AHC0AAA19YN16
Plate: Plate_19_N16
AHC0AAA2YC18
Plate: Plate_2_C18
AHC0AAA20YJ15
Plate: Plate_20_J15
AHC0AAA25YH24
Plate: Plate_25_H24
AHC0AAA8YM17
Plate: Plate_8_M17
AHC0AAA31YD06
Plate: Plate_31_D06
AHC0AAA32YP01
Plate: Plate_32_P01
AHC0AAA35YF10
Plate: Plate_35_F10
AHC0AAA38YG13
Plate: Plate_38_G13
AHC0AAA38YL22
Plate: Plate_38_L22
AHC0AAA39YD07
Plate: Plate_39_D07
AHC0AAA39YH07
Plate: Plate_39_H07
AHC0AAA41YB12
Plate: Plate_41_B12
AHC0AAA42YN03
Plate: Plate_42_N03
AHC0AAA45YB13
Plate: Plate_45_B13
AHC0AAA60YD08
Plate: Plate_60_D08
AHC0AAA60YD22
Plate: Plate_60_D22
AHC0AAA61YI06
Plate: Plate_61_I06
AHC0AAA66YA14
Plate: Plate_66_A14
AHC0AAA66YO11
Plate: Plate_66_O11
AHC0AAA67YI02
Plate: Plate_67_I02
AHC0AAA67YO15
Plate: Plate_67_O15
AHC0AAA72YH19
Plate: Plate_72_H19
AHC0AAA72YL21
Plate: Plate_72_L21
AHC0AAA75YE09
Plate: Plate_75_E09
AHC0AAA75YL10
Plate: Plate_75_L10
AHC0AAA77YA03
Plate: Plate_77_A03
AHC0AAA101YF06
Plate: Plate_101_F06
AHC0AAA101YN05
Plate: Plate_101_N05
AHC0AAA104YO02
Plate: Plate_104_O02
AHC0AAA108YM11
Plate: Plate_108_M11
AHC0AAA110YF05
Plate: Plate_110_F05
AHC0AAA110YN10
Plate: Plate_110_N10
AHC0AAA115YN19
Plate: Plate_115_N19
AHC0AAA121YG15
Plate: Plate_121_G15
AHC0AAA135YC21
Plate: Plate_135_C21
AHC0AAA137YP02
Plate: Plate_137_P02
AHC0AAA138YO24
Plate: Plate_138_O24
AHC0AAA142YO24
Plate: Plate_142_O24
AHC0AAA143YO02
Plate: Plate_143_O02
AHC0AAA145YC17
Plate: Plate_145_C17
AHC0AAA148YB24
Plate: Plate_148_B24
AHC0AAA152YB11
Plate: Plate_152_B11
AHC0AAA83YM20
Plate: Plate_83_M20
AHC0AAA171YG05
Plate: Plate_171_G05
AHC0AAA172YL05
Plate: Plate_172_L05
AHC0AAA174YJ24
Plate: Plate_174_J24
AHC0AAA178YH08
Plate: Plate_178_H08
AHC0AAA178YI03
Plate: Plate_178_I03
AHC0AAA183YE08
Plate: Plate_183_E08
AHC0AAA184YB24
Plate: Plate_184_B24
AHC0AAA184YI13
Plate: Plate_184_I13
AHC0AAA189YP07
Plate: Plate_189_P07
AHC0AAA193YD17
Plate: Plate_193_D17
AHC0AAA194YH04
Plate: Plate_194_H04
AHC0AAA197YD13
Plate: Plate_197_D13
AHC0AAA200YL04
Plate: Plate_200_L04
AHC0AAA206YC19
Plate: Plate_206_C19
AHC0AAA207YH13
Plate: Plate_207_H13
AHC0AAA207YH24
Plate: Plate_207_H24
AHC0AAA212YP11
Plate: Plate_212_P11
AHC0AAA215YH13
Plate: Plate_215_H13
AHC0AAA217YF24
Plate: Plate_217_F24
AHC0AAA221YI12
Plate: Plate_221_I12
AHC0AAA223YE14
Plate: Plate_223_E14
AHC0AAA223YK08
Plate: Plate_223_K08
AHC0AAA224YC18
Plate: Plate_224_C18
AHC0AAA226YF22
Plate: Plate_226_F22
AHC0AAA241YK10
Plate: Plate_241_K10
AHC0AAA244YB04
Plate: Plate_244_B04
AHC0AAA248YC04
Plate: Plate_248_C04
AHC0AAA248YE16
Plate: Plate_248_E16
AHC0AAA248YO09
Plate: Plate_248_O09
AHC0AAA250YA09
Plate: Plate_250_A09
AHC0AAA251YN11
Plate: Plate_251_N11
AHC0AAA255YF13
Plate: Plate_255_F13
AHC0AAA255YJ06
Plate: Plate_255_J06
AHC0AAA266YH22
Plate: Plate_266_H22
AHC0AAA38YI15
Plate: Plate_38_I15
AHC0AAA38YN24
Plate: Plate_38_N24
AHC0AAA39YD05
Plate: Plate_39_D05
AHC0AAA39YH05
Plate: Plate_39_H05
n/a
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IPR Term | Analysis | Definition |
---|---|---|
RRM_dom | Pfam | RNA recognition motif domain |
Nucleotide-bd_a/b_plait_sf | Gene3D | Nucleotide-binding alpha-beta plait domain superfamily |
RBD_domain_sf | SUPERFAMILY | RNA-binding domain superfamily |
RRM_dom | SMART | RNA recognition motif domain |
RRM_dom | ProSiteProfiles | RNA recognition motif domain |
RRM1_SRSF4-like | CDD | Serine/arginine-rich splicing factor SRSF4-like, RNA recognition motif 1 |
GO Term | Annotation Origin | Type |
---|---|---|
mRNA splicing, via spliceosome | Orthology | biological process |
nucleic acid binding | Orthology | molecular function |
RNA binding | Orthology | molecular function |
protein binding | Orthology | molecular function |
nucleus | Orthology | cellular component |
nucleoplasm | Orthology | cellular component |
nucleolus | Orthology | cellular component |
cytosol | Orthology | cellular component |
mRNA processing | Orthology | biological process |
RNA splicing | Orthology | biological process |
nuclear speck | Orthology | cellular component |
animal organ development | Orthology | biological process |
transcription from RNA polymerase II promoter | Orthology | biological process |
organic substance transport | Orthology | biological process |
intracellular transport | Orthology | biological process |
intracellular protein transport | Orthology | biological process |
gene expression | Orthology | biological process |
response to organic substance | Orthology | biological process |
cellular response to organic substance | Orthology | biological process |
positive regulation of gene expression | Orthology | biological process |
protein kinase binding | Orthology | molecular function |
cell cycle | Orthology | biological process |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
---|---|---|
mRNA splicing, via spliceosome | Hs | biological process |
liver development | Hs | biological process |
nucleic acid binding | Hs | molecular function |
RNA binding | Hs | molecular function |
protein binding | Hs | molecular function |
nucleus | Hs | cellular component |
nucleoplasm | Hs | cellular component |
nucleolus | Hs | cellular component |
cytosol | Hs | cellular component |
termination of RNA polymerase II transcription | Hs | biological process |
mRNA splice site selection | Hs | biological process |
mRNA processing | Hs | biological process |
RNA export from nucleus | Hs | biological process |
mRNA export from nucleus | Hs | biological process |
RNA splicing | Hs | biological process |
nuclear speck | Hs | cellular component |
mRNA 3'-end processing | Hs | biological process |
response to insulin | Hs | biological process |
cellular response to insulin stimulus | Hs | biological process |
positive regulation of RNA splicing | Hs | biological process |
protein kinase B binding | Hs | molecular function |
regulation of cell cycle | Hs | biological process |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
---|---|---|---|---|
nucleic acid binding | Hs | molecular function | 208 | 7.96e-64 |
RNA binding | Hs | molecular function | 208 | 7.96e-64 |
protein binding | Hs | molecular function | 208 | 7.96e-64 |
nucleus | Hs | cellular component | 208 | 7.96e-64 |
nucleoplasm | Hs | cellular component | 208 | 7.96e-64 |
nucleolus | Hs | cellular component | 181 | 5.56e-56 |
cytosol | Hs | cellular component | 181 | 5.56e-56 |
nuclear speck | Hs | cellular component | 208 | 7.96e-64 |
pre-mRNA binding | Hs | molecular function | 182 | 1.28e-55 |
protein kinase B binding | Hs | molecular function | 181 | 5.56e-56 |
sequence-specific mRNA binding | Hs | molecular function | 208 | 7.96e-64 |
GO Term | Analysis | Type | e-value |
---|---|---|---|
nucleic acid binding | SUPERFAMILY | molecular function | 7.47E-33 |