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GENE CARD

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Gene Card

Best human hits

CPXM2; MFGE8; RS1

Species

P.mammillata

Unique Gene ID

Phmamm.g00014860

Gene Model ID

Phmamm.CG.MTP2014.S1460.g14860

Location

S1460:20505..22268

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S1460.g14860.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

67 results

AHC0AAA20YO03

Plate: Plate_20_O03

AHC0AAA24YJ19

Plate: Plate_24_J19

AHC0AAA25YI15

Plate: Plate_25_I15

AHC0AAA4YB01

Plate: Plate_4_B01

AHC0AAA9YL22

Plate: Plate_9_L22

AHC0AAA30YO06

Plate: Plate_30_O06

AHC0AAA32YP14

Plate: Plate_32_P14

AHC0AAA38YC16

Plate: Plate_38_C16

AHC0AAA40YL15

Plate: Plate_40_L15

AHC0AAA40YO19

Plate: Plate_40_O19

AHC0AAA42YH23

Plate: Plate_42_H23

AHC0AAA43YB07

Plate: Plate_43_B07

AHC0AAA44YI24

Plate: Plate_44_I24

AHC0AAA48YI17

Plate: Plate_48_I17

AHC0AAA48YM13

Plate: Plate_48_M13

AHC0AAA54YF04

Plate: Plate_54_F04

AHC0AAA55YB24

Plate: Plate_55_B24

AHC0AAA57YC24

Plate: Plate_57_C24

AHC0AAA64YM18

Plate: Plate_64_M18

AHC0AAA70YA01

Plate: Plate_70_A01

AHC0AAA73YJ21

Plate: Plate_73_J21

AHC0AAA75YA12

Plate: Plate_75_A12

AHC0AAA101YP05

Plate: Plate_101_P05

AHC0AAA106YP16

Plate: Plate_106_P16

AHC0AAA112YH19

Plate: Plate_112_H19

AHC0AAA121YJ17

Plate: Plate_121_J17

AHC0AAA122YB15

Plate: Plate_122_B15

AHC0AAA124YJ16

Plate: Plate_124_J16

AHC0AAA127YK21

Plate: Plate_127_K21

AHC0AAA128YK17

Plate: Plate_128_K17

AHC0AAA135YC14

Plate: Plate_135_C14

AHC0AAA139YO13

Plate: Plate_139_O13

AHC0AAA144YD12

Plate: Plate_144_D12

AHC0AAA146YM03

Plate: Plate_146_M03

AHC0AAA151YL14

Plate: Plate_151_L14

AHC0AAA83YM16

Plate: Plate_83_M16

AHC0AAA85YH24

Plate: Plate_85_H24

AHC0AAA89YC13

Plate: Plate_89_C13

AHC0AAA94YO05

Plate: Plate_94_O05

AHC0AAA96YH06

Plate: Plate_96_H06

AHC0AAA106YP14

Plate: Plate_106_P14

AHC0AAA159YB01

Plate: Plate_159_B01

AHC0AAA160YN09

Plate: Plate_160_N09

AHC0AAA164YD17

Plate: Plate_164_D17

AHC0AAA171YF20

Plate: Plate_171_F20

AHC0AAA177YN04

Plate: Plate_177_N04

AHC0AAA182YH18

Plate: Plate_182_H18

AHC0AAA159YB10

Plate: Plate_159_B10

AHC0AAA182YM02

Plate: Plate_182_M02

AHC0AAA212YL09

Plate: Plate_212_L09

AHC0AAA217YA04

Plate: Plate_217_A04

AHC0AAA224YO03

Plate: Plate_224_O03

AHC0AAA193YP21

Plate: Plate_193_P21

AHC0AAA222YI17

Plate: Plate_222_I17

AHC0AAA228YI22

Plate: Plate_228_I22

AHC0AAA227YA18

Plate: Plate_227_A18

AHC0AAA239YM12

Plate: Plate_239_M12

AHC0AAA234YG20

Plate: Plate_234_G20

AHC0AAA226YD09

Plate: Plate_226_D09

AHC0AAA240YI21

Plate: Plate_240_I21

AHC0AAA256YN19

Plate: Plate_256_N19

AHC0AAA242YN09

Plate: Plate_242_N09

AHC0AAA264YD18

Plate: Plate_264_D18

AHC0AAA264YH07

Plate: Plate_264_H07

AHC0AAA253YG06

Plate: Plate_253_G06

AHC0AAA38YC14

Plate: Plate_38_C14

AHC0AAA54YF02

Plate: Plate_54_F02

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
FA58C ProSiteProfiles Coagulation factor 5/8 C-terminal domain
FA58C SMART Coagulation factor 5/8 C-terminal domain
FA58C CDD Coagulation factor 5/8 C-terminal domain
Galactose-bd-like_sf SUPERFAMILY Galactose-binding-like domain superfamily
FA58C Pfam Coagulation factor 5/8 C-terminal domain
Galactose-bd-like_sf Gene3D Galactose-binding-like domain superfamily

GOSlim

15 results

GO Term Annotation Origin Type
integrin binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
endoplasmic reticulum lumen Blast cellular component
plasma membrane Blast cellular component
zinc ion binding Blast molecular function
membrane Blast cellular component
extracellular exosome Blast cellular component
extracellular vesicle Blast cellular component
anion binding Blast molecular function
metallopeptidase activity Blast molecular function
binding Blast molecular function
plasma membrane part Blast cellular component
cell surface Blast cellular component
extracellular region part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
phosphatidylserine binding Hs molecular function 90.1 1.23e-22
metallocarboxypeptidase activity Hs molecular function 98.6 3.27e-24
integrin binding Hs molecular function 87.8 9.21e-21
phosphatidylinositol-4,5-bisphosphate binding Hs molecular function 90.1 1.23e-22
phosphatidylinositol-3,4,5-trisphosphate binding Hs molecular function 90.1 1.23e-22
extracellular region Hs cellular component 98.6 3.27e-24
extracellular space Hs cellular component 98.6 3.27e-24
endoplasmic reticulum lumen Hs cellular component 87.8 9.21e-21
plasma membrane Hs cellular component 90.1 1.23e-22
zinc ion binding Hs molecular function 98.6 3.27e-24
lipid binding Hs molecular function 90.1 1.23e-22
phosphatidylethanolamine binding Hs molecular function 87.8 9.21e-21
external side of plasma membrane Hs cellular component 87.8 9.21e-21
phosphatidylinositol-5-phosphate binding Hs molecular function 90.1 1.23e-22
membrane Hs cellular component 90.1 1.23e-22
extrinsic component of plasma membrane Hs cellular component 90.1 1.23e-22
extracellular matrix Hs cellular component 98.6 3.27e-24
phosphatidylinositol-3-phosphate binding Hs molecular function 90.1 1.23e-22
phosphatidylinositol-3,4-bisphosphate binding Hs molecular function 90.1 1.23e-22
extracellular exosome Hs cellular component 87.8 9.21e-21
phosphatidylinositol-4-phosphate binding Hs molecular function 90.1 1.23e-22
oligosaccharide binding Hs molecular function 90.1 1.23e-22
phosphatidylinositol-3,5-bisphosphate binding Hs molecular function 90.1 1.23e-22
extracellular vesicle Hs cellular component 87.8 9.21e-21

GO (InterProScan)

No result

GO Term Analysis Type e-value