Aniseed - Gene card

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Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Best human hits

CWF19L1; CWF19L2; DBR1

Species

P.mammillata

Unique Gene ID

Phmamm.g00015119

Gene Model ID

Phmamm.CG.MTP2014.S1563.g15119

Location

S1563:12037..15516

Transcript Models and Sequences

Phmamm.CG.MTP2014.S1563.g15119.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

45 results

AHC0AAA98YJ14

Plate: Plate_98_J14

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
Cwf19-like_C_dom-2	Pfam	Cwf19-like protein, C-terminal domain-2
HIT-like_sf	SUPERFAMILY	HIT-like superfamily
HIT-like_sf	Gene3D	HIT-like superfamily
Cwf19-like_C_dom-1	Pfam	Cwf19-like, C-terminal domain-1

GOSlim

7 results

GO Term	Annotation Origin	Type
RNA binding	Blast	molecular function
protein binding	Blast	molecular function
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
hydrolase activity	Blast	molecular function
metal ion binding	Blast	molecular function
RNA metabolic process	Blast	biological process

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

8 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA binding	Hs	molecular function	51.2	9.04e-07
protein binding	Hs	molecular function	89.4	1.29e-18
nucleus	Hs	cellular component	51.2	9.04e-07
nucleoplasm	Hs	cellular component	51.2	9.04e-07
RNA lariat debranching enzyme activity	Hs	molecular function	51.2	9.04e-07
hydrolase activity	Hs	molecular function	51.2	9.04e-07
hydrolase activity, acting on ester bonds	Hs	molecular function	51.2	9.04e-07
metal ion binding	Hs	molecular function	51.2	9.04e-07

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value