Aniseed - Gene card

Gene Card

Best human hits

CLDN1; CLDN19; CLDN7

Species

P.mammillata

Unique Gene ID

Phmamm.g00015213

Gene Model ID

Phmamm.CG.MTP2014.S1601.g15213

Location

S1601:5709..8120

Transcript Models and Sequences

Phmamm.CG.MTP2014.S1601.g15213.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

129 results

AHC0AAA92YL16

Plate: Plate_92_L16

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
Claudin	PANTHER	Claudin
PMP22/EMP/MP20/Claudin	Pfam	PMP-22/EMP/MP20/Claudin superfamily
Claudin_CS	ProSitePatterns	Claudin, conserved site

GOSlim

16 results

GO Term	Annotation Origin	Type
structural molecule activity	Blast	molecular function
protein binding	Blast	molecular function
nucleus	Blast	cellular component
cytoplasm	Blast	cellular component
plasma membrane	Blast	cellular component
integral component of plasma membrane	Blast	cellular component
membrane	Blast	cellular component
integral component of membrane	Blast	cellular component
basolateral plasma membrane	Blast	cellular component
apical plasma membrane	Blast	cellular component
cell junction	Blast	cellular component
identical protein binding	Blast	molecular function
cell adhesion molecule binding	Blast	molecular function
binding	Blast	molecular function
plasma membrane region	Blast	cellular component
plasma membrane part	Blast	cellular component

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
virus receptor activity	Hs	molecular function	107	7.02e-29
structural molecule activity	Hs	molecular function	109	8.97e-30
protein binding	Hs	molecular function	109	8.97e-30
nucleus	Hs	cellular component	107	6.67e-29
cytoplasm	Hs	cellular component	107	6.67e-29
plasma membrane	Hs	cellular component	109	8.97e-30
integral component of plasma membrane	Hs	cellular component	107	7.02e-29
bicellular tight junction	Hs	cellular component	109	8.97e-30
membrane	Hs	cellular component	109	8.97e-30
integral component of membrane	Hs	cellular component	109	8.97e-30
basolateral plasma membrane	Hs	cellular component	109	8.97e-30
apical plasma membrane	Hs	cellular component	107	7.02e-29
apicolateral plasma membrane	Hs	cellular component	109	8.97e-30
lateral plasma membrane	Hs	cellular component	109	8.97e-30
cell junction	Hs	cellular component	109	8.97e-30
identical protein binding	Hs	molecular function	109	8.97e-30
apical junction complex	Hs	cellular component	107	6.67e-29
cell adhesion molecule binding	Hs	molecular function	109	8.97e-30

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
structural molecule activity	PANTHER	molecular function	5.4E-71
bicellular tight junction	PANTHER	cellular component	5.4E-71
integral component of membrane	Pfam	cellular component	4.5E-21