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GENE CARD

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Gene Card

Best human hits

VPS72

Species

P.mammillata

Unique Gene ID

Phmamm.g00015557

Gene Model ID

Phmamm.CG.MTP2014.S1740.g15557

Location

S1740:23317..28906

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S1740.g15557.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

17 results

AHC0AAA13YA04

Plate: Plate_13_A04

AHC0AAA26YA15

Plate: Plate_26_A15

AHC0AAA34YL16

Plate: Plate_34_L16

AHC0AAA39YA12

Plate: Plate_39_A12

AHC0AAA40YD18

Plate: Plate_40_D18

AHC0AAA60YI06

Plate: Plate_60_I06

AHC0AAA64YE06

Plate: Plate_64_E06

AHC0AAA105YF18

Plate: Plate_105_F18

AHC0AAA117YH04

Plate: Plate_117_H04

AHC0AAA152YE11

Plate: Plate_152_E11

AHC0AAA86YC24

Plate: Plate_86_C24

AHC0AAA89YI09

Plate: Plate_89_I09

AHC0AAA98YJ13

Plate: Plate_98_J13

AHC0AAA166YM16

Plate: Plate_166_M16

AHC0AAA172YF08

Plate: Plate_172_F08

AHC0AAA39YA10

Plate: Plate_39_A10

AHC0AAA98YL15

Plate: Plate_98_L15

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
Vps72/YL1 Pfam Vps72/YL1 family
Vps72/YL1 PANTHER Vps72/YL1 family

GOSlim

11 results

GO Term Annotation Origin Type
negative regulation of transcription from RNA polymerase II promoter Orthology biological process
DNA binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
nuclear speck Orthology cellular component
macromolecular complex Orthology cellular component
organelle organization Orthology biological process
developmental process Orthology biological process

GO (Orthology)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
DNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
chromatin organization Hs biological process
chromatin remodeling Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
nuclear speck Hs cellular component
macromolecular complex Hs cellular component
somatic stem cell population maintenance Hs biological process
histone binding Hs molecular function
histone exchange Hs biological process

GO (Blast)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
DNA binding Hs molecular function 148 1.20e-42
protein binding Hs molecular function 148 1.20e-42
nucleus Hs cellular component 148 1.20e-42
nucleoplasm Hs cellular component 148 1.20e-42
nuclear speck Hs cellular component 148 1.20e-42
macromolecular complex Hs cellular component 148 1.20e-42
histone binding Hs molecular function 148 1.20e-42

GO (InterProScan)

4 results

GO Term Analysis Type e-value
nucleus PANTHER cellular component 1.4E-55
chromatin remodeling PANTHER biological process 1.4E-55
regulation of transcription, DNA-templated PANTHER biological process 1.4E-55
histone exchange PANTHER biological process 1.4E-55