Gene Card
Best human hits
CDH2; CDH4; CDH6
Species
Unique Gene ID
Phmamm.g00016028
Gene Model ID
Phmamm.CG.MTP2014.S1995.g16028
Location
S1995:5074..14879
Transcript Models and Sequences
Phmamm.CG.MTP2014.S1995.g16028.01.t
Phmamm.CG.MTP2014.S1995.g16028.02.t
Genoscope Yasuo Villefranche
41 results
AHC0AAA18YN17
Plate: Plate_18_N17
AHC0AAA26YB07
Plate: Plate_26_B07
AHC0AAA6YC15
Plate: Plate_6_C15
AHC0AAA8YC06
Plate: Plate_8_C06
AHC0AAA29YO14
Plate: Plate_29_O14
AHC0AAA33YB04
Plate: Plate_33_B04
AHC0AAA38YG11
Plate: Plate_38_G11
AHC0AAA41YK03
Plate: Plate_41_K03
AHC0AAA42YM24
Plate: Plate_42_M24
AHC0AAA53YC09
Plate: Plate_53_C09
AHC0AAA54YJ22
Plate: Plate_54_J22
AHC0AAA59YI18
Plate: Plate_59_I18
AHC0AAA62YB21
Plate: Plate_62_B21
AHC0AAA63YM02
Plate: Plate_63_M02
AHC0AAA70YJ17
Plate: Plate_70_J17
AHC0AAA107YL21
Plate: Plate_107_L21
AHC0AAA118YA05
Plate: Plate_118_A05
AHC0AAA122YD15
Plate: Plate_122_D15
AHC0AAA124YL19
Plate: Plate_124_L19
AHC0AAA129YI01
Plate: Plate_129_I01
AHC0AAA130YO19
Plate: Plate_130_O19
AHC0AAA134YK13
Plate: Plate_134_K13
AHC0AAA144YJ19
Plate: Plate_144_J19
AHC0AAA151YB01
Plate: Plate_151_B01
AHC0AAA155YE23
Plate: Plate_155_E23
AHC0AAA83YA13
Plate: Plate_83_A13
AHC0AAA83YG20
Plate: Plate_83_G20
AHC0AAA179YH08
Plate: Plate_179_H08
AHC0AAA201YN22
Plate: Plate_201_N22
AHC0AAA215YO17
Plate: Plate_215_O17
AHC0AAA226YP07
Plate: Plate_226_P07
AHC0AAA231YC20
Plate: Plate_231_C20
AHC0AAA232YG07
Plate: Plate_232_G07
AHC0AAA243YF01
Plate: Plate_243_F01
AHC0AAA253YO19
Plate: Plate_253_O19
AHC0AAA261YK24
Plate: Plate_261_K24
AHC0AAA267YJ17
Plate: Plate_267_J17
AHC0AAA267YM18
Plate: Plate_267_M18
AHC0AAA268YK09
Plate: Plate_268_K09
AHC0AAA38YG09
Plate: Plate_38_G09
AHC0AAA54YL24
Plate: Plate_54_L24
n/a
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You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
7 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Cadherin-like | SUPERFAMILY | Cadherin-like |
| Cadherin | Pfam | Cadherin |
| Cadherin_CS | ProSitePatterns | Cadherin conserved site |
| Cadherin | SMART | Cadherin |
| Cadherin | PRINTS | Cadherin |
| Cadherin_cytoplasmic-dom | Pfam | Cadherin, cytoplasmic domain |
| Catenin_binding_dom_sf | Gene3D | Catenin binding domain superfamily |
GOSlim
33 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| calcium ion binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| cytoplasm | Blast | cellular component |
| endoplasmic reticulum lumen | Blast | cellular component |
| plasma membrane | Blast | cellular component |
| integral component of plasma membrane | Blast | cellular component |
| adherens junction | Blast | cellular component |
| focal adhesion | Blast | cellular component |
| cell adhesion | InterProScan | biological process |
| cell surface | Blast | cellular component |
| membrane | Blast | cellular component |
| integral component of membrane | Blast | cellular component |
| basolateral plasma membrane | Blast | cellular component |
| apical plasma membrane | Blast | cellular component |
| enzyme binding | Blast | molecular function |
| protein kinase binding | Blast | molecular function |
| lamellipodium | Blast | cellular component |
| cell junction | Blast | cellular component |
| identical protein binding | Blast | molecular function |
| synapse | Blast | cellular component |
| metal ion binding | Blast | molecular function |
| extracellular exosome | Blast | cellular component |
| organelle | Blast | cellular component |
| postsynapse | Blast | cellular component |
| neuron part | Blast | cellular component |
| plasma membrane part | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
| cell periphery | Blast | cellular component |
| cytoplasmic part | Blast | cellular component |
| cytoskeletal part | Blast | cellular component |
| extracellular region part | Blast | cellular component |
| membrane raft | Blast | cellular component |
| plasma membrane region | Blast | cellular component |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
35 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| calcium ion binding | Hs | molecular function | 355 | 7.84e-110 |
| protein binding | Hs | molecular function | 332 | 1.41e-101 |
| cytoplasm | Hs | cellular component | 332 | 1.41e-101 |
| endoplasmic reticulum lumen | Hs | cellular component | 332 | 1.41e-101 |
| plasma membrane | Hs | cellular component | 355 | 7.84e-110 |
| integral component of plasma membrane | Hs | cellular component | 355 | 7.84e-110 |
| cell-cell junction | Hs | cellular component | 332 | 1.41e-101 |
| adherens junction | Hs | cellular component | 332 | 1.41e-101 |
| cell-cell adherens junction | Hs | cellular component | 332 | 1.41e-101 |
| fascia adherens | Hs | cellular component | 332 | 1.41e-101 |
| focal adhesion | Hs | cellular component | 332 | 1.41e-101 |
| beta-catenin binding | Hs | molecular function | 332 | 1.41e-101 |
| cell surface | Hs | cellular component | 332 | 1.41e-101 |
| postsynaptic density | Hs | cellular component | 332 | 1.41e-101 |
| intercalated disc | Hs | cellular component | 332 | 1.41e-101 |
| membrane | Hs | cellular component | 355 | 7.84e-110 |
| integral component of membrane | Hs | cellular component | 355 | 7.84e-110 |
| basolateral plasma membrane | Hs | cellular component | 332 | 1.41e-101 |
| apical plasma membrane | Hs | cellular component | 332 | 1.41e-101 |
| catenin complex | Hs | cellular component | 332 | 1.41e-101 |
| enzyme binding | Hs | molecular function | 332 | 1.41e-101 |
| protein kinase binding | Hs | molecular function | 332 | 1.41e-101 |
| protein phosphatase binding | Hs | molecular function | 332 | 1.41e-101 |
| lamellipodium | Hs | cellular component | 332 | 1.41e-101 |
| cell junction | Hs | cellular component | 332 | 1.41e-101 |
| cortical actin cytoskeleton | Hs | cellular component | 332 | 1.41e-101 |
| extracellular matrix | Hs | cellular component | 332 | 1.41e-101 |
| sarcolemma | Hs | cellular component | 332 | 1.41e-101 |
| identical protein binding | Hs | molecular function | 332 | 1.41e-101 |
| plasma membrane raft | Hs | cellular component | 332 | 1.41e-101 |
| synapse | Hs | cellular component | 332 | 1.41e-101 |
| alpha-catenin binding | Hs | molecular function | 332 | 1.41e-101 |
| gamma-catenin binding | Hs | molecular function | 332 | 1.41e-101 |
| metal ion binding | Hs | molecular function | 355 | 7.84e-110 |
| extracellular exosome | Hs | cellular component | 332 | 1.41e-101 |
GO (InterProScan)
6 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| calcium ion binding | SMART | molecular function | 3.6E-23 |
| plasma membrane | ProSitePatterns | cellular component | |
| cell adhesion | ProSitePatterns | biological process | |
| homophilic cell adhesion via plasma membrane adhesion molecules | SMART | biological process | 3.6E-23 |
| membrane | SMART | cellular component | 3.6E-23 |
| cell-cell adhesion | PANTHER | biological process | 1.3E-165 |
