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GENE CARD

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Gene Card

Best human hits

PAPD4; ZCCHC11; ZCCHC6

Species

P.mammillata

Unique Gene ID

Phmamm.g00017001

Gene Model ID

Phmamm.CG.MTP2014.S2718.g17001

Location

S2718:7665..10048

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S2718.g17001.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

32 results

AHC0AAA20YL13

Plate: Plate_20_L13

AHC0AAA31YB20

Plate: Plate_31_B20

AHC0AAA51YP20

Plate: Plate_51_P20

AHC0AAA52YM20

Plate: Plate_52_M20

AHC0AAA63YG17

Plate: Plate_63_G17

AHC0AAA63YP08

Plate: Plate_63_P08

AHC0AAA116YO19

Plate: Plate_116_O19

AHC0AAA117YB17

Plate: Plate_117_B17

AHC0AAA127YH20

Plate: Plate_127_H20

AHC0AAA131YC23

Plate: Plate_131_C23

AHC0AAA152YN19

Plate: Plate_152_N19

AHC0AAA153YM21

Plate: Plate_153_M21

AHC0AAA86YH19

Plate: Plate_86_H19

AHC0AAA87YM18

Plate: Plate_87_M18

AHC0AAA87YN07

Plate: Plate_87_N07

AHC0AAA95YE05

Plate: Plate_95_E05

AHC0AAA98YF05

Plate: Plate_98_F05

AHC0AAA195YI04

Plate: Plate_195_I04

AHC0AAA197YH15

Plate: Plate_197_H15

AHC0AAA204YE10

Plate: Plate_204_E10

AHC0AAA206YA16

Plate: Plate_206_A16

AHC0AAA210YD21

Plate: Plate_210_D21

AHC0AAA213YE20

Plate: Plate_213_E20

AHC0AAA215YD05

Plate: Plate_215_D05

AHC0AAA215YD16

Plate: Plate_215_D16

AHC0AAA218YC01

Plate: Plate_218_C01

AHC0AAA228YN21

Plate: Plate_228_N21

AHC0AAA248YO12

Plate: Plate_248_O12

AHC0AAA251YO01

Plate: Plate_251_O01

AHC0AAA256YB04

Plate: Plate_256_B04

AHC0AAA262YH20

Plate: Plate_262_H20

AHC0AAA98YH07

Plate: Plate_98_H07

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term Analysis Definition
PAP_assoc Pfam PAP/25A-associated

GOSlim

24 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
nucleic acid binding Blast molecular function
RNA binding Blast molecular function
protein binding Orthology molecular function
ATP binding Orthology molecular function
extracellular space Blast cellular component
nucleus Orthology cellular component
nucleoplasm Blast cellular component
nucleolus Blast cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
mRNA processing Orthology biological process
zinc ion binding Blast molecular function
transferase activity Orthology molecular function
neuron differentiation Orthology biological process
metal ion binding Orthology molecular function
extracellular exosome Blast cellular component
animal organ development Orthology biological process
immune system process Orthology biological process
cell differentiation Orthology biological process
transferase activity, transferring phosphorus-containing groups Orthology molecular function
nuclear part Orthology cellular component
macromolecular complex Orthology cellular component
RNA metabolic process Orthology biological process

GO (Orthology)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
hematopoietic progenitor cell differentiation Hs biological process
polynucleotide adenylyltransferase activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
mRNA processing Hs biological process
transferase activity Hs molecular function
neuron differentiation Hs biological process
nuclear RNA-directed RNA polymerase complex Hs cellular component
RNA polyadenylation Hs biological process
metal ion binding Hs molecular function
retina development in camera-type eye Hs biological process

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 184 1.78e-54
nucleic acid binding Hs molecular function 116 6.03e-29
RNA binding Hs molecular function 116 6.03e-29
polynucleotide adenylyltransferase activity Hs molecular function 184 1.78e-54
protein binding Hs molecular function 184 1.78e-54
ATP binding Hs molecular function 184 1.78e-54
extracellular space Hs cellular component 116 6.03e-29
nucleus Hs cellular component 184 1.78e-54
nucleoplasm Hs cellular component 109 2.20e-26
nucleolus Hs cellular component 116 6.03e-29
cytoplasm Hs cellular component 184 1.78e-54
cytosol Hs cellular component 184 1.78e-54
zinc ion binding Hs molecular function 116 6.03e-29
transferase activity Hs molecular function 184 1.78e-54
nucleotidyltransferase activity Hs molecular function 116 6.03e-29
nuclear RNA-directed RNA polymerase complex Hs cellular component 184 1.78e-54
metal ion binding Hs molecular function 184 1.78e-54
RNA uridylyltransferase activity Hs molecular function 116 6.03e-29
extracellular exosome Hs cellular component 116 6.03e-29

GO (InterProScan)

No result

GO Term Analysis Type e-value