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GENE CARD

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Gene Card

Best human hits

CASZ1

Species

P.mammillata

Unique Gene ID

Phmamm.g00017996

Gene Model ID

Phmamm.CG.MTP2014.S3755.g17996

Location

S3755:2056..10267

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S3755.g17996.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

17 results

AHC0AAA26YE10

Plate: Plate_26_E10

AHC0AAA54YC17

Plate: Plate_54_C17

AHC0AAA100YP01

Plate: Plate_100_P01

AHC0AAA101YN01

Plate: Plate_101_N01

AHC0AAA105YM03

Plate: Plate_105_M03

AHC0AAA124YC12

Plate: Plate_124_C12

AHC0AAA153YJ16

Plate: Plate_153_J16

AHC0AAA85YF18

Plate: Plate_85_F18

AHC0AAA96YI17

Plate: Plate_96_I17

AHC0AAA173YH12

Plate: Plate_173_H12

AHC0AAA186YK15

Plate: Plate_186_K15

AHC0AAA202YL17

Plate: Plate_202_L17

AHC0AAA203YE13

Plate: Plate_203_E13

AHC0AAA250YO04

Plate: Plate_250_O04

AHC0AAA251YK24

Plate: Plate_251_K24

AHC0AAA255YF11

Plate: Plate_255_F11

AHC0AAA54YE19

Plate: Plate_54_E19

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term Analysis Definition
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type

GOSlim

13 results

GO Term Annotation Origin Type
nucleic acid binding Orthology molecular function
DNA binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytosol Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
multicellular organism development Orthology biological process
intracellular membrane-bounded organelle Orthology cellular component
positive regulation of transcription, DNA-templated Orthology biological process
metal ion binding Orthology molecular function
cell development Orthology biological process
neuron differentiation Orthology biological process

GO (Orthology)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleic acid binding Hs molecular function
DNA binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytosol Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
multicellular organism development Hs biological process
intracellular membrane-bounded organelle Hs cellular component
regulation of neuron differentiation Hs biological process
positive regulation of transcription, DNA-templated Hs biological process
metal ion binding Hs molecular function

GO (Blast)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 52.0 1.23e-06
DNA binding Hs molecular function 52.0 1.23e-06
nucleus Hs cellular component 52.0 1.23e-06
nucleoplasm Hs cellular component 52.0 1.23e-06
cytosol Hs cellular component 52.0 1.23e-06
intracellular membrane-bounded organelle Hs cellular component 52.0 1.23e-06
metal ion binding Hs molecular function 52.0 1.23e-06

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding ProSitePatterns molecular function
regulation of transcription, DNA-templated PANTHER biological process 1.1E-19