Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

SLCO1C1; SLCO2B1; SLCO3A1

Species

P.mammillata

Unique Gene ID

Phmamm.g00018293

Gene Model ID

Phmamm.CG.MTP2014.S4231.g18293

Location

S4231:196..6495

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S4231.g18293.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

2 results

AHC0AAA29YB22

Plate: Plate_29_B22

AHC0AAA151YJ05

Plate: Plate_151_J05

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
OATP Pfam Organic anion transporter polypeptide
OATP PANTHER Organic anion transporter polypeptide
Kazal_dom ProSiteProfiles Kazal domain
OATP TIGRFAM Organic anion transporter polypeptide
MFS_trans_sf SUPERFAMILY MFS transporter superfamily
MFS_dom CDD Major facilitator superfamily domain
Kazal_dom_sf SUPERFAMILY Kazal domain superfamily

GOSlim

9 results

GO Term Annotation Origin Type
protein binding Blast molecular function
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
ion transport Blast biological process
membrane Blast cellular component
integral component of membrane Blast cellular component
apical plasma membrane Blast cellular component
transmembrane transport Blast biological process
organic substance transport Blast biological process

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
transporter activity Hs molecular function 142 7.81e-35
protein binding Hs molecular function 142 7.81e-35
plasma membrane Hs cellular component 142 7.81e-35
integral component of plasma membrane Hs cellular component 142 7.81e-35
organic anion transmembrane transporter activity Hs molecular function 141 1.08e-34
bile acid transmembrane transporter activity Hs molecular function 141 1.08e-34
sodium-independent organic anion transmembrane transporter activity Hs molecular function 142 7.81e-35
thyroid hormone transmembrane transporter activity Hs molecular function 139 5.33e-34
membrane Hs cellular component 142 7.81e-35
integral component of membrane Hs cellular component 142 7.81e-35
apical plasma membrane Hs cellular component 141 1.08e-34

GO (InterProScan)

4 results

GO Term Analysis Type e-value
transporter activity PANTHER molecular function 2.3E-177
protein binding SUPERFAMILY molecular function 6.19E-6
membrane PANTHER cellular component 2.3E-177
transmembrane transport PANTHER biological process 2.3E-177