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Gene Card

Best human hits

PAX2; PAX5; PAX8

Species

B.leachii

Unique Gene ID

Boleac.g00006792

Gene Model ID

Boleac.CG.SB_v3.S289.g06792

Location

S289:127880..137871

Transcript Models and Sequences

  Boleac.CG.SB_v3.S289.g06792.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
Paired_dom SMART Paired domain
WH-like_DNA-bd_sf Gene3D Winged helix-like DNA-binding domain superfamily
Paired_dom Pfam Paired domain
Paired_dom CDD Paired domain
Paired_dom ProSitePatterns Paired domain
Paired_dom PRINTS Paired domain
Paired_dom ProSiteProfiles Paired domain
Homeobox-like_sf SUPERFAMILY Homeobox-like domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 246 1.56e-72
RNA polymerase II core promoter sequence-specific DNA binding Hs molecular function 246 1.56e-72
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 246 1.56e-72
core promoter proximal region sequence-specific DNA binding Hs molecular function 242 3.24e-71
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 246 1.56e-72
fibrillar center Hs cellular component 238 5.17e-70
DNA binding Hs molecular function 246 1.56e-72
transcription factor activity, sequence-specific DNA binding Hs molecular function 246 1.56e-72
thyroid-stimulating hormone receptor activity Hs molecular function 246 1.56e-72
protein binding Hs molecular function 246 1.56e-72
nucleus Hs cellular component 246 1.56e-72
nucleoplasm Hs cellular component 246 1.56e-72
nucleolus Hs cellular component 242 3.24e-71
lysosome Hs cellular component 242 3.24e-71
Golgi apparatus Hs cellular component 242 3.24e-71
microtubule organizing center Hs cellular component 242 3.24e-71
cytosol Hs cellular component 238 5.17e-70
transcription factor binding Hs molecular function 242 3.24e-71
superoxide-generating NADPH oxidase activity Hs molecular function 242 3.24e-71
macromolecular complex Hs cellular component 242 3.24e-71
protein-DNA complex Hs cellular component 242 3.24e-71
centriolar satellite Hs cellular component 242 3.24e-71
intracellular membrane-bounded organelle Hs cellular component 238 5.17e-70
sequence-specific DNA binding Hs molecular function 246 1.56e-72
transcription regulatory region DNA binding Hs molecular function 246 1.56e-72

GO (InterProScan)

2 results

GO Term Analysis Type e-value
DNA binding SMART molecular function 2.3E-88
regulation of transcription, DNA-templated SMART biological process 2.3E-88





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