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GENE CARD

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Gene Card

Best human hits

ATRX; UBTD1; UBTD2

Species

B.leachii

Unique Gene ID

Boleac.g00007956

Gene Model ID

Boleac.CG.SB_v3.S337.g07956

Location

S337:89871..99574

Transcript Models and Sequences

  Boleac.CG.SB_v3.S337.g07956.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

13 results

IPR Term Analysis Definition
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
SNF2_N Pfam SNF2-related, N-terminal domain
Helicase_ATP-bd ProSiteProfiles Helicase superfamily 1/2, ATP-binding domain
Ubiquitin-like_domsf SUPERFAMILY Ubiquitin-like domain superfamily
Helicase_ATP-bd SMART Helicase superfamily 1/2, ATP-binding domain
UBD_sf Gene3D Ubiquitin-binding domain superfamily
Helicase_C CDD Helicase, C-terminal
Helicase_C ProSiteProfiles Helicase, C-terminal
Ubiquitin_dom ProSiteProfiles Ubiquitin domain
Helicase_C Pfam Helicase, C-terminal
SNF2-like_sf Gene3D SNF2-like, N-terminal domain superfamily
Ubiquitin_dom Pfam Ubiquitin domain
UBD Pfam Ubiquitin-binding domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

31 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 242 2.40e-64
nuclear chromosome Hs cellular component 242 2.40e-64
condensed nuclear chromosome, centromeric region Hs cellular component 242 2.40e-64
chromosome, telomeric region Hs cellular component 242 2.40e-64
nuclear chromosome, telomeric region Hs cellular component 242 2.40e-64
heterochromatin Hs cellular component 242 2.40e-64
DNA binding Hs molecular function 242 2.40e-64
DNA helicase activity Hs molecular function 242 2.40e-64
chromatin binding Hs molecular function 242 2.40e-64
helicase activity Hs molecular function 242 2.40e-64
protein binding Hs molecular function 242 2.40e-64
ATP binding Hs molecular function 242 2.40e-64
nucleus Hs cellular component 242 2.40e-64
nucleoplasm Hs cellular component 242 2.40e-64
chromosome Hs cellular component 242 2.40e-64
nuclear heterochromatin Hs cellular component 242 2.40e-64
pericentric heterochromatin Hs cellular component 242 2.40e-64
cytoplasm Hs cellular component 228 9.89e-68
DNA translocase activity Hs molecular function 242 2.40e-64
nuclear body Hs cellular component 242 2.40e-64
PML body Hs cellular component 242 2.40e-64
hydrolase activity Hs molecular function 242 2.40e-64
nuclear pericentric heterochromatin Hs cellular component 242 2.40e-64
telomeric heterochromatin Hs cellular component 242 2.40e-64
methylated histone binding Hs molecular function 242 2.40e-64
histone binding Hs molecular function 242 2.40e-64
ubiquitin binding Hs molecular function 228 9.89e-68
metal ion binding Hs molecular function 242 2.40e-64
chromo shadow domain binding Hs molecular function 242 2.40e-64
SWI/SNF superfamily-type complex Hs cellular component 242 2.40e-64
nuclear subtelomeric heterochromatin Hs cellular component 242 2.40e-64

GO (InterProScan)

3 results

GO Term Analysis Type e-value
protein binding Pfam molecular function 1.4E-10
ATP binding Pfam molecular function 5.1E-33
ubiquitin binding Pfam molecular function 3.5E-22