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GENE CARD

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Gene Card

Best human hits

TUBA3C; TUBA3D; TUBA3E

Species

B.schlosseri

Unique Gene ID

Boschl.g00049780

Gene Model ID

Boschl.CG.Botznik2013.chr1.g49780

Location

chr1:4296787..4297925

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chr1.g49780.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

12 results

IPR Term Analysis Definition
Tubulin_FtsZ_GTPase SMART Tubulin/FtsZ, GTPase domain
Tubulin/FtsZ_2-layer-sand-dom Pfam Tubulin/FtsZ, 2-layer sandwich domain
Tubulin_FtsZ_GTPase Pfam Tubulin/FtsZ, GTPase domain
Tubulin PRINTS Tubulin
Tubulin/FtsZ_2-layer-sand-dom SMART Tubulin/FtsZ, 2-layer sandwich domain
Tubulin PANTHER Tubulin
Alpha_tubulin PRINTS Alpha tubulin
Tub_FtsZ_C SUPERFAMILY Tubulin/FtsZ, C-terminal
Tubulin_CS ProSitePatterns Tubulin, conserved site
Tubulin/FtsZ_GTPase_sf SUPERFAMILY Tubulin/FtsZ, GTPase domain superfamily
Tubulin/FtsZ_C_sf Gene3D Tubulin/FtsZ, C-terminal domain superfamily
Tubulin/FtsZ_GTPase_sf Gene3D Tubulin/FtsZ, GTPase domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
GTPase activity Hs molecular function
structural constituent of cytoskeleton Hs molecular function
protein binding Hs molecular function
GTP binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
cytoskeleton Hs cellular component
microtubule Hs cellular component
cytoskeleton organization Hs biological process
microtubule-based process Hs biological process
microtubule cytoskeleton Hs cellular component

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 546 0.0
GTPase activity Hs molecular function 546 0.0
structural constituent of cytoskeleton Hs molecular function 546 0.0
protein binding Hs molecular function 546 0.0
GTP binding Hs molecular function 546 0.0
nucleus Hs cellular component 546 0.0
cytoplasm Hs cellular component 546 0.0
cytoskeleton Hs cellular component 546 0.0
microtubule Hs cellular component 546 0.0
microtubule cytoskeleton Hs cellular component 546 0.0

GO (InterProScan)

5 results

GO Term Analysis Type e-value
GTPase activity SMART molecular function 5.5E-76
structural constituent of cytoskeleton PRINTS molecular function 7.6E-58
GTP binding PRINTS molecular function 7.6E-58
microtubule PANTHER cellular component 2.9E-194
microtubule-based process PANTHER biological process 2.9E-194