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GENE CARD

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Gene Card

Best human hits

SALL1; SALL3

Species

B.schlosseri

Unique Gene ID

Boschl.g00051004

Gene Model ID

Boschl.CG.Botznik2013.chr13.g51004

Location

chr13:6846115..6851393

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chr13.g51004.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type SMART Zinc finger C2H2-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
heterochromatin Hs cellular component 223 3.06e-62
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 223 3.06e-62
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 223 3.06e-62
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 223 3.06e-62
nucleic acid binding Hs molecular function 223 3.06e-62
DNA binding Hs molecular function 223 3.06e-62
transcription factor activity, sequence-specific DNA binding Hs molecular function 223 3.06e-62
histone deacetylase activity Hs molecular function 223 3.06e-62
protein binding Hs molecular function 223 3.06e-62
nucleus Hs cellular component 223 3.06e-62
nucleoplasm Hs cellular component 223 3.06e-62
cytoplasm Hs cellular component 223 3.06e-62
beta-catenin binding Hs molecular function 223 3.06e-62
chromocenter Hs cellular component 223 3.06e-62
NuRD complex Hs cellular component 223 3.06e-62
sequence-specific DNA binding Hs molecular function 223 3.06e-62
transcription regulatory region DNA binding Hs molecular function 223 3.06e-62
metal ion binding Hs molecular function 223 3.06e-62

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 1.9E-4