Gene Card
Best human hits
CIRBP; TRA2A; TRA2B
Species
Unique Gene ID
Boschl.g00002522
Gene Model ID
Boschl.CG.Botznik2013.chrUn.g02522
Location
chrUn:16494256..16495305
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
5 results
| IPR Term | Analysis | Definition |
|---|---|---|
| RRM_dom | SMART | RNA recognition motif domain |
| RBD_domain_sf | SUPERFAMILY | RNA-binding domain superfamily |
| RRM_dom | Pfam | RNA recognition motif domain |
| RRM_dom | ProSiteProfiles | RNA recognition motif domain |
| Nucleotide-bd_a/b_plait_sf | Gene3D | Nucleotide-binding alpha-beta plait domain superfamily |
| GO Term | Annotation Origin | Type |
|---|
GO (Orthology)
27 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| response to reactive oxygen species | Hs | biological process |
| RNA splicing, via transesterification reactions | Hs | biological process |
| regulation of alternative mRNA splicing, via spliceosome | Hs | biological process |
| mRNA splicing, via spliceosome | Hs | biological process |
| nucleic acid binding | Hs | molecular function |
| RNA binding | Hs | molecular function |
| mRNA binding | Hs | molecular function |
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nuclear inner membrane | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| spliceosomal complex | Hs | cellular component |
| nucleolus | Hs | cellular component |
| mRNA processing | Hs | biological process |
| RNA splicing | Hs | biological process |
| protein domain specific binding | Hs | molecular function |
| pre-mRNA binding | Hs | molecular function |
| identical protein binding | Hs | molecular function |
| intracellular membrane-bounded organelle | Hs | cellular component |
| regulation of RNA splicing | Hs | biological process |
| negative regulation of mRNA splicing, via spliceosome | Hs | biological process |
| positive regulation of mRNA splicing, via spliceosome | Hs | biological process |
| perinuclear region of cytoplasm | Hs | cellular component |
| protein oligomerization | Hs | biological process |
| poly-purine tract binding | Hs | molecular function |
| cellular response to glucose stimulus | Hs | biological process |
| embryonic brain development | Hs | biological process |
GO (Blast)
20 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleic acid binding | Hs | molecular function | 108 | 2.56e-29 |
| RNA binding | Hs | molecular function | 108 | 2.56e-29 |
| mRNA binding | Hs | molecular function | 108 | 2.56e-29 |
| mRNA 3'-UTR binding | Hs | molecular function | 49.7 | 8.24e-08 |
| protein binding | Hs | molecular function | 108 | 2.56e-29 |
| nucleus | Hs | cellular component | 108 | 2.56e-29 |
| nuclear inner membrane | Hs | cellular component | 108 | 2.56e-29 |
| nucleoplasm | Hs | cellular component | 108 | 2.56e-29 |
| spliceosomal complex | Hs | cellular component | 108 | 2.56e-29 |
| nucleolus | Hs | cellular component | 102 | 2.22e-27 |
| cytoplasm | Hs | cellular component | 49.7 | 8.24e-08 |
| cytoplasmic stress granule | Hs | cellular component | 49.7 | 8.24e-08 |
| protein domain specific binding | Hs | molecular function | 108 | 2.56e-29 |
| translation repressor activity | Hs | molecular function | 49.7 | 8.24e-08 |
| pre-mRNA binding | Hs | molecular function | 108 | 2.56e-29 |
| identical protein binding | Hs | molecular function | 108 | 2.56e-29 |
| intracellular membrane-bounded organelle | Hs | cellular component | 102 | 2.22e-27 |
| perinuclear region of cytoplasm | Hs | cellular component | 108 | 2.56e-29 |
| small ribosomal subunit rRNA binding | Hs | molecular function | 49.7 | 8.24e-08 |
| poly-purine tract binding | Hs | molecular function | 108 | 2.56e-29 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | SUPERFAMILY | molecular function | 1.49E-18 |
