Gene Card
Best human hits
SDE2; SF3A3
Species
Unique Gene ID
Cisavi.g00002673
Gene Model ID
Cisavi.CG.ENS81.R155.454259-459031
Location
R155:454258..459031
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
5 results
| IPR Term | Analysis | Definition |
|---|---|---|
| SF3A3_dom | Pfam | SF3A3 domain |
| SF3A3 | PANTHER | Splicing factor 3A subunit 3 |
| DUF3449 | Pfam | Domain of unknown function DUF3449 |
| SF3a60_bindingd | Pfam | Splicing factor SF3a60 binding domain |
| Matrin/U1-C_Znf_C2H2 | ProSiteProfiles | Matrin/U1-C, C2H2-type zinc finger |
| GO Term | Annotation Origin | Type |
|---|
GO (Orthology)
15 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| RNA splicing, via transesterification reactions | Hs | biological process |
| mRNA 3'-splice site recognition | Hs | biological process |
| mRNA splicing, via spliceosome | Hs | biological process |
| nucleic acid binding | Hs | molecular function |
| RNA binding | Hs | molecular function |
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| spliceosomal complex | Hs | cellular component |
| mRNA processing | Hs | biological process |
| zinc ion binding | Hs | molecular function |
| RNA splicing | Hs | biological process |
| nuclear speck | Hs | cellular component |
| metal ion binding | Hs | molecular function |
| catalytic step 2 spliceosome | Hs | cellular component |
GO (Blast)
11 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleic acid binding | Hs | molecular function | 685 | 0.0 |
| DNA binding | Hs | molecular function | 53.5 | 1.40e-07 |
| RNA binding | Hs | molecular function | 685 | 0.0 |
| protein binding | Hs | molecular function | 685 | 0.0 |
| nucleus | Hs | cellular component | 685 | 0.0 |
| nucleoplasm | Hs | cellular component | 685 | 0.0 |
| spliceosomal complex | Hs | cellular component | 685 | 0.0 |
| zinc ion binding | Hs | molecular function | 685 | 0.0 |
| nuclear speck | Hs | cellular component | 685 | 0.0 |
| metal ion binding | Hs | molecular function | 685 | 0.0 |
| catalytic step 2 spliceosome | Hs | cellular component | 685 | 0.0 |
GO (InterProScan)
6 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| mRNA splicing, via spliceosome | PANTHER | biological process | 1.9E-182 |
| nucleic acid binding | ProSiteProfiles | molecular function | 8.962 |
| RNA binding | PANTHER | molecular function | 1.9E-182 |
| nucleus | ProSiteProfiles | cellular component | 8.962 |
| spliceosomal complex | PANTHER | cellular component | 1.9E-182 |
| zinc ion binding | ProSiteProfiles | molecular function | 8.962 |
