Aniseed - Gene card

Gene Card

Best human hits

TBX2; TBX3; TBX6

Species

C.savignyi

Unique Gene ID

Cisavi.g00003127

Gene Model ID

Cisavi.CG.ENS81.R16.5041500-5055627

Location

R16:5041499..5055627

Transcript Models and Sequences

Cisavi.CG.ENS81.R16.5041500-5055627.20057.t
Cisavi.CG.ENS81.R16.5041500-5055627.20058.t
Cisavi.CG.ENS81.R16.5041500-5055627.20059.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term	Analysis	Definition
TF_T-box_CS	ProSitePatterns	Transcription factor, T-box, conserved site
T-box_sf	Gene3D	T-box superfamily
TF_T-box	PRINTS	Transcription factor, T-box
p53-like_TF_DNA-bd	SUPERFAMILY	p53-like transcription factor, DNA-binding
TF_T-box	ProSiteProfiles	Transcription factor, T-box
TF_T-box	Pfam	Transcription factor, T-box
TF_Brachyury	PRINTS	Transcription factor, Brachyury
TF_T-box	CDD	Transcription factor, T-box
TF_T-box	SMART	Transcription factor, T-box
TF_T-box	PANTHER	Transcription factor, T-box

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	221	1.45e-67
RNA polymerase II distal enhancer sequence-specific DNA binding	Hs	molecular function	212	1.48e-66
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	221	1.45e-67
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	221	1.45e-67
RNA polymerase II transcription factor binding	Hs	molecular function	218	3.30e-66
RNA polymerase II activating transcription factor binding	Hs	molecular function	218	3.30e-66
transcriptional repressor activity, RNA polymerase II transcription factor binding	Hs	molecular function	212	1.48e-66
DNA binding	Hs	molecular function	221	1.45e-67
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	221	1.45e-67
protein binding	Hs	molecular function	221	1.45e-67
nucleus	Hs	cellular component	221	1.45e-67
transcription factor complex	Hs	cellular component	221	1.45e-67
sequence-specific DNA binding	Hs	molecular function	221	1.45e-67

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
transcription factor activity, sequence-specific DNA binding	PANTHER	molecular function	6.9E-122
nucleus	PANTHER	cellular component	6.9E-122
regulation of transcription, DNA-templated	PANTHER	biological process	6.9E-122