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Gene Card

Best human hits

SLC6A1; SLC6A14; SLC6A5

Species

C.savignyi

Unique Gene ID

Cisavi.g00005169

Gene Model ID

Cisavi.CG.ENS81.R25.2197215-2217634

Location

R25:2197214..2217634

Transcript Models and Sequences

  Cisavi.CG.ENS81.R25.2197215-2217634.15835.t
Cisavi.CG.ENS81.R25.2197215-2217634.15836.t
Cisavi.CG.ENS81.R25.2197215-2217634.15837.t
Cisavi.CG.ENS81.R25.2197215-2217634.15838.t
Cisavi.CG.ENS81.R25.2197215-2217634.15839.t
Cisavi.CG.ENS81.R25.2197215-2217634.15840.t
Cisavi.CG.ENS81.R25.2197215-2217634.15841.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Na/ntran_symport PRINTS Sodium:neurotransmitter symporter
Na/ntran_symport PANTHER Sodium:neurotransmitter symporter
SNS_sf SUPERFAMILY Sodium:neurotransmitter symporter superfamily
Na/ntran_symport ProSitePatterns Sodium:neurotransmitter symporter
Na/ntran_symport Pfam Sodium:neurotransmitter symporter
Na/ntran_symport ProSiteProfiles Sodium:neurotransmitter symporter

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
transporter activity Hs molecular function 508 5.26e-173
neurotransmitter:sodium symporter activity Hs molecular function 518 8.78e-178
gamma-aminobutyric acid:sodium symporter activity Hs molecular function 518 8.78e-178
plasma membrane Hs cellular component 518 8.78e-178
integral component of plasma membrane Hs cellular component 518 8.78e-178
cell surface Hs cellular component 518 8.78e-178
amino acid transmembrane transporter activity Hs molecular function 508 5.26e-173
glycine transmembrane transporter activity Hs molecular function 517 1.53e-174
symporter activity Hs molecular function 518 8.78e-178
glycine:sodium symporter activity Hs molecular function 517 1.53e-174
membrane Hs cellular component 518 8.78e-178
integral component of membrane Hs cellular component 518 8.78e-178
axon Hs cellular component 518 8.78e-178
brush border membrane Hs cellular component 508 5.26e-173
vesicle Hs cellular component 508 5.26e-173
neuron projection Hs cellular component 518 8.78e-178
metal ion binding Hs molecular function 518 8.78e-178
extracellular exosome Hs cellular component 508 5.26e-173

GO (InterProScan)

3 results

GO Term Analysis Type e-value
neurotransmitter:sodium symporter activity PANTHER molecular function 1.2E-221
neurotransmitter transport PANTHER biological process 1.2E-221
integral component of membrane PANTHER cellular component 1.2E-221

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