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GENE CARD

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Gene Card

Best human hits

IGF2BP1; IGF2BP2; IGF2BP3

Species

C.savignyi

Unique Gene ID

Cisavi.g00011254

Gene Model ID

Cisavi.CG.ENS81.R9.3161488-3163227

Location

R9:3161487..3163227

Transcript Models and Sequences

  Cisavi.CG.ENS81.R9.3161488-3163227.19019.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
RRM_dom Pfam RNA recognition motif domain
RBD_domain_sf SUPERFAMILY RNA-binding domain superfamily
KH_dom SMART K Homology domain
KH_dom_type_1_sf SUPERFAMILY K Homology domain, type 1 superfamily
KH_dom_type_1 Pfam K Homology domain, type 1
KH_dom_type_1_sf Gene3D K Homology domain, type 1 superfamily
RRM_dom SMART RNA recognition motif domain
RRM_dom ProSiteProfiles RNA recognition motif domain
Nucleotide-bd_a/b_plait_sf Gene3D Nucleotide-binding alpha-beta plait domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

31 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleic acid binding Hs molecular function
RNA binding Hs molecular function
mRNA binding Hs molecular function
mRNA 3'-UTR binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
RNA localization Hs biological process
translation Hs biological process
regulation of translation Hs biological process
anatomical structure morphogenesis Hs biological process
cytoplasmic stress granule Hs cellular component
negative regulation of translation Hs biological process
lamellipodium Hs cellular component
filopodium Hs cellular component
axon Hs cellular component
dendrite Hs cellular component
growth cone Hs cellular component
intracellular ribonucleoprotein complex Hs cellular component
cell projection Hs cellular component
dendritic spine Hs cellular component
regulation of mRNA stability Hs biological process
translation regulator activity Hs molecular function
mRNA 5'-UTR binding Hs molecular function
perinuclear region of cytoplasm Hs cellular component
mRNA transport Hs biological process
CRD-mediated mRNA stability complex Hs cellular component
neuronal stem cell population maintenance Hs biological process

GO (Blast)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 478 1.00e-163
RNA binding Hs molecular function 478 1.00e-163
mRNA binding Hs molecular function 478 1.00e-163
mRNA 3'-UTR binding Hs molecular function 478 1.00e-163
protein binding Hs molecular function 478 1.00e-163
nucleus Hs cellular component 478 1.00e-163
nucleoplasm Hs cellular component 478 1.00e-163
cytoplasm Hs cellular component 478 1.00e-163
cytosol Hs cellular component 478 1.00e-163
cytoskeleton Hs cellular component 461 1.72e-156
cytoplasmic stress granule Hs cellular component 478 1.00e-163
lamellipodium Hs cellular component 478 1.00e-163
filopodium Hs cellular component 478 1.00e-163
axon Hs cellular component 478 1.00e-163
dendrite Hs cellular component 478 1.00e-163
growth cone Hs cellular component 478 1.00e-163
intracellular ribonucleoprotein complex Hs cellular component 478 1.00e-163
cell projection Hs cellular component 478 1.00e-163
dendritic spine Hs cellular component 478 1.00e-163
translation regulator activity Hs molecular function 478 1.00e-163
mRNA 5'-UTR binding Hs molecular function 478 1.00e-163
perinuclear region of cytoplasm Hs cellular component 478 1.00e-163
CRD-mediated mRNA stability complex Hs cellular component 478 1.00e-163

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding SUPERFAMILY molecular function 1.11E-19
RNA binding Gene3D molecular function 2.7E-22