Aniseed - Gene card

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Genomicus Synteny Browser

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Gene Annotations

InterPro

10 results

IPR Term	Analysis	Definition
Nucl_hrmn_rcpt_lig-bd	SMART	Nuclear hormone receptor, ligand-binding domain
Znf_hrmn_rcpt	PRINTS	Zinc finger, nuclear hormone receptor-type
Nuclear_hrmn_rcpt	PRINTS	Nuclear hormone receptor
Znf_hrmn_rcpt	Pfam	Zinc finger, nuclear hormone receptor-type
Znf_hrmn_rcpt	ProSitePatterns	Zinc finger, nuclear hormone receptor-type
Znf_hrmn_rcpt	SMART	Zinc finger, nuclear hormone receptor-type
Znf_NHR/GATA	Gene3D	Zinc finger, NHR/GATA-type
Znf_hrmn_rcpt	ProSiteProfiles	Zinc finger, nuclear hormone receptor-type
NHR_like_dom_sf	SUPERFAMILY	Nuclear hormone receptor-like domain superfamily
Nucl_hrmn_rcpt_lig-bd	Pfam	Nuclear hormone receptor, ligand-binding domain

GOSlim

47 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
cell morphogenesis	Orthology	biological process
RNA polymerase II regulatory region sequence-specific DNA binding	Orthology	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Orthology	molecular function
DNA binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
transcription coactivator activity	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
cytoskeleton	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
transcription initiation from RNA polymerase II promoter	Orthology	biological process
signal transduction	Orthology	biological process
multicellular organism development	Orthology	biological process
zinc ion binding	Orthology	molecular function
negative regulation of cell proliferation	Orthology	biological process
positive regulation of gene expression	Orthology	biological process
nuclear body	Orthology	cellular component
sequence-specific DNA binding	Orthology	molecular function
negative regulation of transcription, DNA-templated	Orthology	biological process
positive regulation of transcription, DNA-templated	Orthology	biological process
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
metal ion binding	Orthology	molecular function
system development	Orthology	biological process
response to lipid	Orthology	biological process
signaling receptor activity	Orthology	molecular function
cellular response to organic substance	Orthology	biological process
cellular metabolic process	Orthology	biological process
metal ion transport	Orthology	biological process
cellular process	Orthology	biological process
cell	Orthology	cellular component
binding	Orthology	molecular function
animal organ development	Orthology	biological process
anatomical structure morphogenesis	Orthology	biological process
small molecule binding	Orthology	molecular function
anion binding	Orthology	molecular function
organic cyclic compound binding	Orthology	molecular function
macromolecular complex	Orthology	cellular component
receptor binding	Orthology	molecular function
transcription factor binding	Orthology	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Orthology	molecular function
nuclear part	Orthology	cellular component

GO (Orthology)

53 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
cell morphogenesis	Hs	biological process
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function
skeletal system development	Hs	biological process
DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
steroid hormone receptor activity	Hs	molecular function
transcription coactivator activity	Hs	molecular function
nuclear receptor activity	Hs	molecular function
androgen receptor activity	Hs	molecular function
thyroid hormone receptor activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
cytoskeleton	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
transcription initiation from RNA polymerase II promoter	Hs	biological process
xenobiotic metabolic process	Hs	biological process
calcium ion transport	Hs	biological process
cellular calcium ion homeostasis	Hs	biological process
signal transduction	Hs	biological process
multicellular organism development	Hs	biological process
drug binding	Hs	molecular function
steroid metabolic process	Hs	biological process
zinc ion binding	Hs	molecular function
negative regulation of cell proliferation	Hs	biological process
calcitriol receptor activity	Hs	molecular function
animal organ morphogenesis	Hs	biological process
positive regulation of gene expression	Hs	biological process
nuclear body	Hs	cellular component
androgen receptor signaling pathway	Hs	biological process
intracellular receptor signaling pathway	Hs	biological process
lithocholic acid receptor activity	Hs	molecular function
receptor complex	Hs	cellular component
steroid hormone mediated signaling pathway	Hs	biological process
sequence-specific DNA binding	Hs	molecular function
intermediate filament cytoskeleton	Hs	cellular component
negative regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
metal ion binding	Hs	molecular function
retinoid X receptor binding	Hs	molecular function
intestinal absorption	Hs	biological process
vitamin D receptor signaling pathway	Hs	biological process
vitamin D response element binding	Hs	molecular function
RNA polymerase II transcription factor complex	Hs	cellular component
calcitriol binding	Hs	molecular function
lithocholic acid binding	Hs	molecular function

GO (Blast)

30 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	124	2.00e-30
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	147	1.12e-38
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	124	2.00e-30
DNA binding	Hs	molecular function	147	1.12e-38
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	147	1.12e-38
steroid hormone receptor activity	Hs	molecular function	147	1.12e-38
transcription coactivator activity	Hs	molecular function	124	2.00e-30
nuclear receptor activity	Hs	molecular function	147	1.12e-38
androgen receptor activity	Hs	molecular function	121	2.68e-30
thyroid hormone receptor activity	Hs	molecular function	124	2.00e-30
protein binding	Hs	molecular function	147	1.12e-38
nucleus	Hs	cellular component	147	1.12e-38
nucleoplasm	Hs	cellular component	147	1.12e-38
cytoplasm	Hs	cellular component	147	1.12e-38
cytosol	Hs	cellular component	121	2.68e-30
cytoskeleton	Hs	cellular component	121	2.68e-30
drug binding	Hs	molecular function	124	2.00e-30
zinc ion binding	Hs	molecular function	147	1.12e-38
calcitriol receptor activity	Hs	molecular function	147	1.12e-38
nuclear body	Hs	cellular component	124	2.00e-30
lithocholic acid receptor activity	Hs	molecular function	147	1.12e-38
receptor complex	Hs	cellular component	147	1.12e-38
sequence-specific DNA binding	Hs	molecular function	147	1.12e-38
intermediate filament cytoskeleton	Hs	cellular component	124	2.00e-30
metal ion binding	Hs	molecular function	147	1.12e-38
retinoid X receptor binding	Hs	molecular function	147	1.12e-38
vitamin D response element binding	Hs	molecular function	147	1.12e-38
RNA polymerase II transcription factor complex	Hs	cellular component	147	1.12e-38
calcitriol binding	Hs	molecular function	147	1.12e-38
lithocholic acid binding	Hs	molecular function	147	1.12e-38

GO (InterProScan)

8 results

GO Term	Analysis	Type	e-value
DNA binding	PRINTS	molecular function	1.4E-16
transcription factor activity, sequence-specific DNA binding	SMART	molecular function	4.6E-32
steroid hormone receptor activity	PRINTS	molecular function	1.4E-16
nucleus	SMART	cellular component	4.6E-32
regulation of transcription, DNA-templated	SMART	biological process	2.3E-37
zinc ion binding	SMART	molecular function	4.6E-32
steroid hormone mediated signaling pathway	SMART	biological process	2.3E-37
sequence-specific DNA binding	SMART	molecular function	4.6E-32

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