Aniseed - Gene card

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
Troponin	Pfam	Troponin
Troponin_sf	Gene3D	Troponin domain superfamily
TNNT	PANTHER	Troponin T

GOSlim

15 results

GO Term	Annotation Origin	Type
actin binding	Orthology	molecular function
protein binding	Orthology	molecular function
cytosol	Orthology	cellular component
cytoskeletal protein binding	Orthology	molecular function
cytoplasmic part	Orthology	cellular component
cytoskeletal part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
intracellular non-membrane-bounded organelle	Orthology	cellular component
organelle part	Orthology	cellular component
nucleoside-triphosphatase activity	Orthology	molecular function
positive regulation of hydrolase activity	Orthology	biological process
protein oligomerization	Orthology	biological process
organelle organization	Orthology	biological process
heart development	Orthology	biological process
anatomical structure morphogenesis	Orthology	biological process

GO (Orthology)

30 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
skeletal muscle contraction	Hs	biological process
actin binding	Hs	molecular function
protein binding	Hs	molecular function
tropomyosin binding	Hs	molecular function
cytosol	Hs	cellular component
troponin complex	Hs	cellular component
striated muscle thin filament	Hs	cellular component
muscle contraction	Hs	biological process
regulation of muscle contraction	Hs	biological process
regulation of striated muscle contraction	Hs	biological process
regulation of heart contraction	Hs	biological process
myofibril	Hs	cellular component
sarcomere	Hs	cellular component
troponin C binding	Hs	molecular function
protein binding, bridging	Hs	molecular function
calcium-dependent ATPase activity	Hs	molecular function
troponin I binding	Hs	molecular function
troponin T binding	Hs	molecular function
negative regulation of ATPase activity	Hs	biological process
positive regulation of ATPase activity	Hs	biological process
regulation of ATPase activity	Hs	biological process
negative regulation of muscle contraction	Hs	biological process
calcium-dependent protein binding	Hs	molecular function
protein heterooligomerization	Hs	biological process
response to calcium ion	Hs	biological process
actin crosslink formation	Hs	biological process
ventricular cardiac muscle tissue morphogenesis	Hs	biological process
cardiac muscle contraction	Hs	biological process
cardiac myofibril	Hs	cellular component
cardiac Troponin complex	Hs	cellular component

GO (Blast)

16 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
actin binding	Hs	molecular function	183	2.64e-56
protein binding	Hs	molecular function	180	1.29e-54
tropomyosin binding	Hs	molecular function	183	2.64e-56
cytosol	Hs	cellular component	183	2.64e-56
troponin complex	Hs	cellular component	183	2.64e-56
striated muscle thin filament	Hs	cellular component	180	1.29e-54
myofibril	Hs	cellular component	180	1.29e-54
sarcomere	Hs	cellular component	180	1.29e-54
troponin C binding	Hs	molecular function	183	2.64e-56
protein binding, bridging	Hs	molecular function	180	1.29e-54
calcium-dependent ATPase activity	Hs	molecular function	183	2.64e-56
troponin I binding	Hs	molecular function	183	2.64e-56
troponin T binding	Hs	molecular function	148	1.57e-42
calcium-dependent protein binding	Hs	molecular function	183	2.64e-56
cardiac myofibril	Hs	cellular component	180	1.29e-54
cardiac Troponin complex	Hs	cellular component	180	1.29e-54

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
troponin complex	PANTHER	cellular component	3.2E-82
regulation of muscle contraction	PANTHER	biological process	3.2E-82

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location