Aniseed - Gene card

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Hist-Lys_N-MeTrfase_SETD3	ProSiteProfiles	Histone-lysine N-methyltransferase, SETD3
Rubisco_LSMT_subst-bd_sf	Gene3D	Rubisco LSMT, substrate-binding domain superfamily
Rubisco_LSMT_subst-bd_sf	SUPERFAMILY	Rubisco LSMT, substrate-binding domain superfamily
SET_dom	Pfam	SET domain
Rubisco_LSMT_subst-bd	Pfam	Rubisco LSMT, substrate-binding domain

GOSlim

35 results

GO Term	Annotation Origin	Type
transcription coactivator activity	Orthology	molecular function
calcium ion binding	Blast	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
nucleolus	Blast	cellular component
cytosol	Blast	cellular component
plasma membrane	Blast	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
endomembrane system	Blast	cellular component
membrane	Blast	cellular component
integral component of membrane	Blast	cellular component
transferase activity	Orthology	molecular function
lamellipodium	Blast	cellular component
cell junction	Blast	cellular component
cell projection	Blast	cellular component
neuron projection	Blast	cellular component
synapse	Blast	cellular component
positive regulation of transcription, DNA-templated	Orthology	biological process
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
metal ion binding	Blast	molecular function
regulation of nucleic acid-templated transcription	Orthology	biological process
intracellular non-membrane-bounded organelle	Orthology	cellular component
nuclear lumen	Orthology	cellular component
transcription factor binding	Orthology	molecular function
organelle organization	Orthology	biological process
metabolic process	Orthology	biological process
cellular protein modification process	Orthology	biological process
enzyme binding	Blast	molecular function
molecular function regulator	Blast	molecular function
membrane part	Blast	cellular component
kinase activity	Blast	molecular function
enzyme activator activity	Blast	molecular function
cytoplasmic vesicle	Blast	cellular component

GO (Orthology)

24 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nuclear chromatin	Hs	cellular component
RNA polymerase II activating transcription factor binding	Hs	molecular function
transcription coactivator activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
chromatin organization	Hs	biological process
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
methyltransferase activity	Hs	molecular function
histone H3-K36 methylation	Hs	biological process
transferase activity	Hs	molecular function
peptidyl-lysine methylation	Hs	biological process
peptidyl-lysine trimethylation	Hs	biological process
histone-lysine N-methyltransferase activity	Hs	molecular function
peptidyl-lysine monomethylation	Hs	biological process
peptidyl-lysine dimethylation	Hs	biological process
methylation	Hs	biological process
histone methyltransferase activity (H3-K4 specific)	Hs	molecular function
positive regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
histone methyltransferase activity (H3-K36 specific)	Hs	molecular function
histone H3-K4 methylation	Hs	biological process
regulation of nucleic acid-templated transcription	Hs	biological process

GO (Blast)

32 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nuclear chromatin	Hs	cellular component	337	8.40e-107
RNA polymerase II activating transcription factor binding	Hs	molecular function	337	8.40e-107
transcription coactivator activity	Hs	molecular function	337	8.40e-107
guanyl-nucleotide exchange factor activity	Hs	molecular function	40.0	0.005
Rho guanyl-nucleotide exchange factor activity	Hs	molecular function	40.0	0.005
calcium ion binding	Hs	molecular function	40.0	0.005
protein binding	Hs	molecular function	337	8.40e-107
nucleus	Hs	cellular component	337	8.40e-107
nucleoplasm	Hs	cellular component	337	8.40e-107
nucleolus	Hs	cellular component	73.6	1.16e-13
cytosol	Hs	cellular component	40.0	0.005
plasma membrane	Hs	cellular component	40.0	0.005
clathrin-coated pit	Hs	cellular component	40.0	0.005
methyltransferase activity	Hs	molecular function	337	8.40e-107
endomembrane system	Hs	cellular component	40.0	0.005
membrane	Hs	cellular component	40.0	0.005
integral component of membrane	Hs	cellular component	40.0	0.005
protein-lysine N-methyltransferase activity	Hs	molecular function	73.6	1.16e-13
transferase activity	Hs	molecular function	337	8.40e-107
histone-lysine N-methyltransferase activity	Hs	molecular function	337	8.40e-107
kinase activator activity	Hs	molecular function	40.0	0.005
lamellipodium	Hs	cellular component	40.0	0.005
cell junction	Hs	cellular component	40.0	0.005
endocytic vesicle	Hs	cellular component	40.0	0.005
protein complex scaffold activity	Hs	molecular function	40.0	0.005
histone methyltransferase activity (H3-K4 specific)	Hs	molecular function	337	8.40e-107
cell projection	Hs	cellular component	40.0	0.005
neuron projection	Hs	cellular component	40.0	0.005
synapse	Hs	cellular component	40.0	0.005
metal ion binding	Hs	molecular function	40.0	0.005
histone methyltransferase activity (H3-K36 specific)	Hs	molecular function	337	8.40e-107
proline-rich region binding	Hs	molecular function	40.0	0.005

GO (InterProScan)

5 results

GO Term	Analysis	Type	e-value
transcription coactivator activity	ProSiteProfiles	molecular function	92.002
protein binding	Pfam	molecular function	8.8E-8
histone H3-K36 methylation	ProSiteProfiles	biological process	92.002
peptidyl-lysine methylation	ProSiteProfiles	biological process	92.002
histone methyltransferase activity (H3-K36 specific)	ProSiteProfiles	molecular function	92.002

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location