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GENE CARD

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Gene Card

Best human hits

TM6SF1; TM6SF2

Unique Gene ID

Cirobu.g00001282

Gene Model ID

KH2012:KH.C1.989

Location

KhC1:9204794..9207905

Transcript Models and Sequences

  KH2012:KH.C1.989.v1.A.SL1-1

External Database Gene Card

External database links

2 results

Collections

Gateway full ORF

2 results

cima898461

Plate: VES72_D10

cien211599

Plate: VES103_P03

Gene collection 1 (N. Satoh)

1 result

cibd076h19

Plate: R1CiGC38n12

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term Analysis Definition
EXPERA ProSiteProfiles EXPERA domain

GOSlim

11 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
lysosome Orthology cellular component
lysosomal membrane Orthology cellular component
endoplasmic reticulum Orthology cellular component
endoplasmic reticulum membrane Orthology cellular component
membrane Orthology cellular component
integral component of membrane Orthology cellular component
organic substance metabolic process Orthology biological process
cytoplasmic part Orthology cellular component
intracellular membrane-bounded organelle Orthology cellular component
bounding membrane of organelle Orthology cellular component

GO (Orthology)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
lysosome Hs cellular component
lysosomal membrane Hs cellular component
endoplasmic reticulum Hs cellular component
endoplasmic reticulum membrane Hs cellular component
lipid metabolic process Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
regulation of lipid metabolic process Hs biological process
endoplasmic reticulum-Golgi intermediate compartment membrane Hs cellular component

GO (Blast)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protein binding Hs molecular function 158 6.67e-45
lysosome Hs cellular component 158 6.67e-45
lysosomal membrane Hs cellular component 158 6.67e-45
endoplasmic reticulum Hs cellular component 123 7.45e-32
endoplasmic reticulum membrane Hs cellular component 123 7.45e-32
membrane Hs cellular component 158 6.67e-45
integral component of membrane Hs cellular component 158 6.67e-45
endoplasmic reticulum-Golgi intermediate compartment membrane Hs cellular component 123 7.45e-32

GO (InterProScan)

No result

GO Term Analysis Type e-value