Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000004695
NCBI Reference Sequence	XM_002128082.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg017k09

Plate: R1CiGC18o11

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
TAF_TATA-bd	SMART	TATA box binding protein associated factor (TAF)
Histone-fold	SUPERFAMILY	Histone-fold
ARM-type_fold	SUPERFAMILY	Armadillo-type fold
TAF_TATA-bd	Pfam	TATA box binding protein associated factor (TAF)
Histone-fold	Gene3D	Histone-fold
TAF6	PANTHER	Transcription initiation factor TFIID subunit 6
TAF6_C	Pfam	TAF6, C-terminal HEAT repeat domain

GOSlim

22 results

GO Term	Annotation Origin	Type
DNA binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
transcription coactivator activity	Orthology	molecular function
binding	Blast	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytosol	Blast	cellular component
transcription, DNA-templated	Orthology	biological process
DNA-templated transcription, initiation	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
macromolecular complex	Orthology	cellular component
protein heterodimerization activity	Orthology	molecular function
extracellular exosome	Orthology	cellular component
nucleoplasm part	Orthology	cellular component
organelle organization	Orthology	biological process
transferase activity	Orthology	molecular function
cellular protein modification process	Orthology	biological process
regulation of molecular function	Orthology	biological process
receptor binding	Blast	molecular function
transcription factor binding	Blast	molecular function

GO (Orthology)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
histone deacetylase complex	Hs	cellular component
SAGA complex	Hs	cellular component
DNA binding	Hs	molecular function
transcription coactivator activity	Hs	molecular function
histone acetyltransferase activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
transcription factor TFIID complex	Hs	cellular component
chromatin remodeling	Hs	biological process
transcription, DNA-templated	Hs	biological process
DNA-templated transcription, initiation	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
STAGA complex	Hs	cellular component
histone H3 acetylation	Hs	biological process
SLIK (SAGA-like) complex	Hs	cellular component
protein heterodimerization activity	Hs	molecular function
regulation of sequence-specific DNA binding transcription factor activity	Hs	biological process
extracellular exosome	Hs	cellular component

GO (Blast)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
histone deacetylase complex	Hs	cellular component	227	4.92e-67
SAGA complex	Hs	cellular component	227	4.92e-67
DNA binding	Hs	molecular function	227	4.92e-67
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	109	2.75e-25
transcription coactivator activity	Hs	molecular function	227	4.92e-67
histone acetyltransferase activity	Hs	molecular function	227	4.92e-67
binding	Hs	molecular function	109	2.75e-25
protein binding	Hs	molecular function	227	4.92e-67
nucleus	Hs	cellular component	227	4.92e-67
nucleoplasm	Hs	cellular component	227	4.92e-67
transcription factor TFIID complex	Hs	cellular component	227	4.92e-67
cytosol	Hs	cellular component	109	2.75e-25
aryl hydrocarbon receptor binding	Hs	molecular function	109	2.75e-25
STAGA complex	Hs	cellular component	227	4.92e-67
macromolecular complex	Hs	cellular component	109	2.75e-25
transcription factor TFTC complex	Hs	cellular component	109	2.75e-25
SLIK (SAGA-like) complex	Hs	cellular component	227	4.92e-67
protein heterodimerization activity	Hs	molecular function	227	4.92e-67
extracellular exosome	Hs	cellular component	227	4.92e-67
MLL1 complex	Hs	cellular component	109	2.75e-25

GO (InterProScan)

8 results

GO Term	Analysis	Type	e-value
SAGA complex	PANTHER	cellular component	1.7E-91
binding	SUPERFAMILY	molecular function	1.83E-6
nucleus	Pfam	cellular component	1.2E-14
transcription factor TFIID complex	PANTHER	cellular component	1.7E-91
DNA-templated transcription, initiation	Pfam	biological process	1.0E-15
SLIK (SAGA-like) complex	PANTHER	cellular component	1.7E-91
protein heterodimerization activity	Gene3D	molecular function	9.8E-22
regulation of sequence-specific DNA binding transcription factor activity	Pfam	biological process	1.2E-14

Gene Card

Best human hits

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Transcript Models and Sequences