Aniseed - Gene card

Gene Card

Best human hits

NDUFS2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00001887

Gene Model ID

KH2012:KH.C10.84

Location

KhC10:858866..863571

Transcript Models and Sequences

KH2012:KH.C10.84.v1.A.ND2-1
KH2012:KH.C10.84.v2.A.SL1-1
KH2012:KH.C10.84.v2.A.SL3-1
KH2012:KH.C10.84.v2.A.SL4-1

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000005858

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg023p02

Plate: R1CiGC19g02

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
NiFe-Hase_large	SUPERFAMILY	[NiFe]-hydrogenase, large subunit
NDH1_su_D/H	Hamap	NAD(P)H-quinone oxidoreductase subunit D/H
NDH1_su_D/H	TIGRFAM	NAD(P)H-quinone oxidoreductase subunit D/H
NADH_Q_OxRdtase_suD	Pfam	NADH-quinone oxidoreductase, subunit D
NADH_Q_OxRdtase_suD_sf	Gene3D	NADH-quinone oxidoreductase, subunit D superfamily
NADH_UbQ_OxRdtase_49kDa_CS	ProSitePatterns	NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site

GOSlim

21 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
nucleoplasm	Orthology	cellular component
mitochondrion	Orthology	cellular component
mitochondrial inner membrane	Orthology	cellular component
mitochondrial matrix	Orthology	cellular component
response to oxidative stress	Orthology	biological process
membrane	Orthology	cellular component
ubiquitin protein ligase binding	Orthology	molecular function
metal ion binding	Orthology	molecular function
oxidation-reduction process	Orthology	biological process
catalytic activity	Orthology	molecular function
membrane part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
phosphorylation	Orthology	biological process
transmembrane transport	Orthology	biological process
monovalent inorganic cation transport	Orthology	biological process
cellular metabolic process	Orthology	biological process
organelle organization	Orthology	biological process
cofactor binding	Orthology	molecular function
nucleotide binding	Orthology	molecular function
coenzyme binding	Orthology	molecular function

GO (Orthology)

24 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
NADH dehydrogenase activity	Hs	molecular function
protein binding	Hs	molecular function
nucleoplasm	Hs	cellular component
mitochondrion	Hs	cellular component
mitochondrial inner membrane	Hs	cellular component
mitochondrial respiratory chain complex I	Hs	cellular component
mitochondrial matrix	Hs	cellular component
mitochondrial electron transport, NADH to ubiquinone	Hs	biological process
response to oxidative stress	Hs	biological process
NADH dehydrogenase (ubiquinone) activity	Hs	molecular function
electron carrier activity	Hs	molecular function
membrane	Hs	cellular component
oxidoreductase activity	Hs	molecular function
oxidoreductase activity, acting on NAD(P)H	Hs	molecular function
ubiquitin protein ligase binding	Hs	molecular function
mitochondrial respiratory chain complex I assembly	Hs	biological process
mitochondrial ATP synthesis coupled electron transport	Hs	biological process
metal ion binding	Hs	molecular function
quinone binding	Hs	molecular function
NAD binding	Hs	molecular function
iron-sulfur cluster binding	Hs	molecular function
4 iron, 4 sulfur cluster binding	Hs	molecular function
oxidation-reduction process	Hs	biological process
respiratory chain	Hs	cellular component

GO (Blast)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score
NADH dehydrogenase activity	Hs	molecular function	636
protein binding	Hs	molecular function	636
nucleoplasm	Hs	cellular component	636
mitochondrion	Hs	cellular component	636
mitochondrial inner membrane	Hs	cellular component	636
mitochondrial respiratory chain complex I	Hs	cellular component	636
mitochondrial matrix	Hs	cellular component	636
NADH dehydrogenase (ubiquinone) activity	Hs	molecular function	636
electron carrier activity	Hs	molecular function	636
membrane	Hs	cellular component	636
oxidoreductase activity	Hs	molecular function	636
oxidoreductase activity, acting on NAD(P)H	Hs	molecular function	636
ubiquitin protein ligase binding	Hs	molecular function	636
metal ion binding	Hs	molecular function	636
quinone binding	Hs	molecular function	636
NAD binding	Hs	molecular function	636
iron-sulfur cluster binding	Hs	molecular function	636
4 iron, 4 sulfur cluster binding	Hs	molecular function	636
respiratory chain	Hs	cellular component	636

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
oxidoreductase activity, acting on NAD(P)H	TIGRFAM	molecular function	9.0E-177
quinone binding	Pfam	molecular function	2.8E-124
NAD binding	Pfam	molecular function	2.8E-124
oxidation-reduction process	TIGRFAM	biological process	9.0E-177