Aniseed - Gene card

Gene Card

Best human hits

SLC22A15; SLC22A16; SLC22A4

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00003456

Gene Model ID

KH2012:KH.C13.54

Location

KhC13:359444..368475

Transcript Models and Sequences

KH2012:KH.C13.54.v1.R.ND2-1
KH2012:KH.C13.54.v2.B.SL1-1

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000002388

Collections

Gateway full ORF

1 result

cien102104

Plate: VES86_N05

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
MFS_trans_sf	SUPERFAMILY	MFS transporter superfamily
MFS_sugar_transport-like	Pfam	Major facilitator, sugar transporter-like
MFS_dom	CDD	Major facilitator superfamily domain

GOSlim

13 results

GO Term	Annotation Origin	Type
nucleotide binding	Blast	molecular function
protein binding	Blast	molecular function
ATP binding	Blast	molecular function
mitochondrion	Blast	cellular component
plasma membrane	Blast	cellular component
integral component of plasma membrane	Blast	cellular component
ion transport	Blast	biological process
membrane	Blast	cellular component
integral component of membrane	Blast	cellular component
apical plasma membrane	Blast	cellular component
transmembrane transport	Blast	biological process
organic substance transport	Blast	biological process
cation transport	Blast	biological process

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	112	2.26e-28
transporter activity	Hs	molecular function	112	2.26e-28
amine transmembrane transporter activity	Hs	molecular function	123	5.50e-32
protein binding	Hs	molecular function	112	2.26e-28
ATP binding	Hs	molecular function	112	2.26e-28
mitochondrion	Hs	cellular component	112	2.26e-28
plasma membrane	Hs	cellular component	123	5.50e-32
integral component of plasma membrane	Hs	cellular component	112	2.26e-28
secondary active organic cation transmembrane transporter activity	Hs	molecular function	112	2.26e-28
organic anion transmembrane transporter activity	Hs	molecular function	131	3.35e-35
organic cation transmembrane transporter activity	Hs	molecular function	123	5.50e-32
carnitine transmembrane transporter activity	Hs	molecular function	123	5.50e-32
symporter activity	Hs	molecular function	112	2.26e-28
cation:cation antiporter activity	Hs	molecular function	112	2.26e-28
quaternary ammonium group transmembrane transporter activity	Hs	molecular function	112	2.26e-28
membrane	Hs	cellular component	131	3.35e-35
integral component of membrane	Hs	cellular component	131	3.35e-35
apical plasma membrane	Hs	cellular component	112	2.26e-28
transmembrane transporter activity	Hs	molecular function	131	3.35e-35
PDZ domain binding	Hs	molecular function	112	2.26e-28

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
integral component of membrane	Pfam	cellular component	1.0E-13
transmembrane transporter activity	Pfam	molecular function	1.0E-13
transmembrane transport	Pfam	biological process	1.0E-13