Gene Card
Best human hits
VPS11; VPS18
Unique Gene ID
Cirobu.g00004025
Gene Model ID
KH2012:KH.C14.578
Location
KhC14:3158342..3172435
External database links
1 result
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000003974 |
Gateway full ORF
2 results
cien194909
Plate: VES100_K12
cien201741
Plate: VES101_G16
Gene collection 1 (N. Satoh)
1 result
citb037e14
Plate: R1CiGC32k18
n/a
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
11 results
| IPR Term | Analysis | Definition |
|---|---|---|
| VPS11 | PANTHER | Vacuolar protein sorting-associated protein 11 |
| VPS11_C | Pfam | Vacuolar protein sorting protein 11, C-terminal |
| Znf_RING | ProSiteProfiles | Zinc finger, RING-type |
| Znf_RING/FYVE/PHD | Gene3D | Zinc finger, RING/FYVE/PHD-type |
| VPS11 | PIRSF | Vacuolar protein sorting-associated protein 11 |
| Clathrin_H-chain/VPS_repeat | Pfam | Clathrin, heavy chain/VPS, 7-fold repeat |
| TPR-like_helical_dom_sf | Gene3D | Tetratricopeptide-like helical domain superfamily |
| ARM-type_fold | SUPERFAMILY | Armadillo-type fold |
| WD40_repeat_dom_sf | SUPERFAMILY | WD40-repeat-containing domain superfamily |
| Clathrin_H-chain/VPS_repeat | ProSiteProfiles | Clathrin, heavy chain/VPS, 7-fold repeat |
| WD40/YVTN_repeat-like_dom_sf | Gene3D | WD40/YVTN repeat-like-containing domain superfamily |
GOSlim
25 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nucleotide binding | Orthology | molecular function |
| actin binding | Blast | molecular function |
| binding | Orthology | molecular function |
| protein binding | Orthology | molecular function |
| intracellular | Orthology | cellular component |
| lysosome | Orthology | cellular component |
| lysosomal membrane | Orthology | cellular component |
| endosome | Orthology | cellular component |
| early endosome | Orthology | cellular component |
| intracellular protein transport | Orthology | biological process |
| protein transport | Orthology | biological process |
| membrane | Orthology | cellular component |
| cytoplasmic vesicle | Orthology | cellular component |
| metal ion binding | Orthology | molecular function |
| vacuole | Orthology | cellular component |
| cytoskeletal part | Orthology | cellular component |
| membrane organization | Orthology | biological process |
| organelle organization | Orthology | biological process |
| intracellular transport | Orthology | biological process |
| cytoplasmic part | Orthology | cellular component |
| membrane part | Orthology | cellular component |
| macromolecular complex | Orthology | cellular component |
| intracellular organelle part | Orthology | cellular component |
| whole membrane | Orthology | cellular component |
| bounding membrane of organelle | Orthology | cellular component |
GO (Orthology)
36 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| nucleotide binding | Hs | molecular function |
| binding | Hs | molecular function |
| protein binding | Hs | molecular function |
| intracellular | Hs | cellular component |
| lysosome | Hs | cellular component |
| lysosomal membrane | Hs | cellular component |
| endosome | Hs | cellular component |
| early endosome | Hs | cellular component |
| late endosome | Hs | cellular component |
| autophagosome | Hs | cellular component |
| actin filament | Hs | cellular component |
| intracellular protein transport | Hs | biological process |
| vesicle docking involved in exocytosis | Hs | biological process |
| autophagy | Hs | biological process |
| endosome organization | Hs | biological process |
| lysosome organization | Hs | biological process |
| endosome to lysosome transport | Hs | biological process |
| protein transport | Hs | biological process |
| membrane | Hs | cellular component |
| vesicle-mediated transport | Hs | biological process |
| protein domain specific binding | Hs | molecular function |
| syntaxin binding | Hs | molecular function |
| AP-3 adaptor complex | Hs | cellular component |
| clathrin-coated vesicle | Hs | cellular component |
| endocytic vesicle | Hs | cellular component |
| protein binding, bridging | Hs | molecular function |
| HOPS complex | Hs | cellular component |
| cytoplasmic vesicle | Hs | cellular component |
| regulation of protein stability | Hs | biological process |
| late endosome membrane | Hs | cellular component |
| CORVET complex | Hs | cellular component |
| endosomal vesicle fusion | Hs | biological process |
| regulation of SNARE complex assembly | Hs | biological process |
| metal ion binding | Hs | molecular function |
| toxin transport | Hs | biological process |
| positive regulation of cellular protein catabolic process | Hs | biological process |
GO (Blast)
24 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleotide binding | Hs | molecular function | 938 | 0.0 |
| actin binding | Hs | molecular function | 45.8 | 1.17e-04 |
| binding | Hs | molecular function | 938 | 0.0 |
| protein binding | Hs | molecular function | 938 | 0.0 |
| intracellular | Hs | cellular component | 938 | 0.0 |
| lysosome | Hs | cellular component | 938 | 0.0 |
| lysosomal membrane | Hs | cellular component | 938 | 0.0 |
| endosome | Hs | cellular component | 938 | 0.0 |
| early endosome | Hs | cellular component | 938 | 0.0 |
| late endosome | Hs | cellular component | 938 | 0.0 |
| autophagosome | Hs | cellular component | 938 | 0.0 |
| actin filament | Hs | cellular component | 938 | 0.0 |
| membrane | Hs | cellular component | 938 | 0.0 |
| protein domain specific binding | Hs | molecular function | 938 | 0.0 |
| syntaxin binding | Hs | molecular function | 938 | 0.0 |
| AP-3 adaptor complex | Hs | cellular component | 938 | 0.0 |
| clathrin-coated vesicle | Hs | cellular component | 938 | 0.0 |
| endocytic vesicle | Hs | cellular component | 938 | 0.0 |
| protein binding, bridging | Hs | molecular function | 938 | 0.0 |
| HOPS complex | Hs | cellular component | 938 | 0.0 |
| cytoplasmic vesicle | Hs | cellular component | 938 | 0.0 |
| late endosome membrane | Hs | cellular component | 938 | 0.0 |
| CORVET complex | Hs | cellular component | 938 | 0.0 |
| metal ion binding | Hs | molecular function | 938 | 0.0 |
GO (InterProScan)
4 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| binding | SUPERFAMILY | molecular function | 1.92E-6 |
| protein binding | Gene3D | molecular function | 2.7E-13 |
| intracellular protein transport | Pfam | biological process | 1.2E-11 |
| vesicle-mediated transport | Pfam | biological process | 1.2E-11 |
