Gene Card
Best human hits
DDX27; DDX47; DDX56
Unique Gene ID
Cirobu.g00004953
Gene Model ID
KH2012:KH.C2.728
Location
KhC2:5434365..5439178
External database links
2 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000005185 |
| NCBI Reference Sequence | XM_002132101.4 |
Gateway full ORF
2 results
cima832611
Plate: VES62_L08
cima8115500
Plate: VES74_B12
Gene collection 1 (N. Satoh)
2 results
ciad075o06
Plate: R1CiGC07d21
cibd029p14
Plate: R1CiGC38a03
n/a
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Click here to see the tree inference method
InterPro
9 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Helicase_ATP-bd | SMART | Helicase superfamily 1/2, ATP-binding domain |
| RNA_helicase_DEAD_Q_motif | ProSiteProfiles | RNA helicase, DEAD-box type, Q motif |
| P-loop_NTPase | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolase |
| Helicase_C | CDD | Helicase, C-terminal |
| Helicase_C | SMART | Helicase, C-terminal |
| DEAD/DEAH_box_helicase_dom | Pfam | DEAD/DEAH box helicase domain |
| Helicase_ATP-bd | ProSiteProfiles | Helicase superfamily 1/2, ATP-binding domain |
| Helicase_C | ProSiteProfiles | Helicase, C-terminal |
| Helicase_C | Pfam | Helicase, C-terminal |
GOSlim
16 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nucleotide binding | Orthology | molecular function |
| nucleic acid binding | Orthology | molecular function |
| RNA binding | Orthology | molecular function |
| protein binding | Blast | molecular function |
| ATP binding | Orthology | molecular function |
| nucleus | Orthology | cellular component |
| nucleoplasm | Blast | cellular component |
| nucleolus | Orthology | cellular component |
| cytoplasm | Orthology | cellular component |
| membrane | Orthology | cellular component |
| hydrolase activity | Orthology | molecular function |
| nucleoside-triphosphatase activity | Orthology | molecular function |
| RNA processing | Orthology | biological process |
| RNA metabolic process | Orthology | biological process |
| neuron projection development | Orthology | biological process |
| intracellular non-membrane-bounded organelle | Blast | cellular component |
GO (Orthology)
15 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| nucleotide binding | Hs | molecular function |
| nucleic acid binding | Hs | molecular function |
| RNA binding | Hs | molecular function |
| ATP-dependent RNA helicase activity | Hs | molecular function |
| helicase activity | Hs | molecular function |
| ATP binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nucleolus | Hs | cellular component |
| cytoplasm | Hs | cellular component |
| rRNA processing | Hs | biological process |
| RNA secondary structure unwinding | Hs | biological process |
| positive regulation of neuron projection development | Hs | biological process |
| membrane | Hs | cellular component |
| hydrolase activity | Hs | molecular function |
| ribosome biogenesis | Hs | biological process |
GO (Blast)
14 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleotide binding | Hs | molecular function | 569 | 0.0 |
| nucleic acid binding | Hs | molecular function | 569 | 0.0 |
| RNA binding | Hs | molecular function | 569 | 0.0 |
| ATP-dependent RNA helicase activity | Hs | molecular function | 569 | 0.0 |
| helicase activity | Hs | molecular function | 569 | 0.0 |
| protein binding | Hs | molecular function | 207 | 1.18e-60 |
| ATP binding | Hs | molecular function | 569 | 0.0 |
| nucleus | Hs | cellular component | 569 | 0.0 |
| nucleoplasm | Hs | cellular component | 207 | 1.18e-60 |
| chromosome | Hs | cellular component | 178 | 8.95e-48 |
| nucleolus | Hs | cellular component | 569 | 0.0 |
| cytoplasm | Hs | cellular component | 569 | 0.0 |
| membrane | Hs | cellular component | 569 | 0.0 |
| hydrolase activity | Hs | molecular function | 569 | 0.0 |
GO (InterProScan)
2 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | Pfam | molecular function | 2.5E-38 |
| ATP binding | Pfam | molecular function | 2.5E-38 |
