Aniseed - Gene card

Gene Card

Best human hits

PIGA

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00004974

Gene Model ID

KH2012:KH.C2.747

Location

KhC2:3681458..3684682

Transcript Models and Sequences

KH2012:KH.C2.747.v1.A.ND1-1
KH2012:KH.C2.747.v1.A.nonSL2-1
KH2012:KH.C2.747.v1.A.nonSL6-1
KH2012:KH.C2.747.v1.A.nonSL7-1
KH2012:KH.C2.747.v1.A.SL4-1
KH2012:KH.C2.747.v2.A.SL3-1
KH2012:KH.C2.747.v2.A.SL5-1

External Database Gene Card

External database links

1 result

Database	Gene ID
NCBI Reference Sequence	XM_002120469.4

Collections

Gene collection 1 (N. Satoh)

2 results

citb033h22

Plate: R1CiGC31p10

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term	Analysis	Definition
Glyco_trans_1	Pfam	Glycosyl transferase, family 1
PIGA_GPI_anchor_biosynthesis	Pfam	PIGA, GPI anchor biosynthesis

GOSlim

9 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
endoplasmic reticulum	Orthology	cellular component
endoplasmic reticulum membrane	Orthology	cellular component
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
transferase activity	Orthology	molecular function
macromolecular complex	Orthology	cellular component
phosphate-containing compound metabolic process	Orthology	biological process
cellular protein modification process	Orthology	biological process

GO (Orthology)

11 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex	Hs	cellular component
protein binding	Hs	molecular function
endoplasmic reticulum	Hs	cellular component
endoplasmic reticulum membrane	Hs	cellular component
GPI anchor biosynthetic process	Hs	biological process
UDP-glycosyltransferase activity	Hs	molecular function
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
transferase activity	Hs	molecular function
transferase activity, transferring glycosyl groups	Hs	molecular function
phosphatidylinositol N-acetylglucosaminyltransferase activity	Hs	molecular function

GO (Blast)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex	Hs	cellular component	395	8.70e-137
protein binding	Hs	molecular function	395	8.70e-137
endoplasmic reticulum	Hs	cellular component	395	8.70e-137
endoplasmic reticulum membrane	Hs	cellular component	395	8.70e-137
UDP-glycosyltransferase activity	Hs	molecular function	395	8.70e-137
membrane	Hs	cellular component	395	8.70e-137
integral component of membrane	Hs	cellular component	395	8.70e-137
transferase activity	Hs	molecular function	395	8.70e-137
transferase activity, transferring glycosyl groups	Hs	molecular function	395	8.70e-137
phosphatidylinositol N-acetylglucosaminyltransferase activity	Hs	molecular function	395	8.70e-137

GO (InterProScan)