Aniseed - Gene card

Gene Card

Best human hits

FARS2; FARSA; FDXACB1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00005290

Gene Model ID

KH2012:KH.C3.135

Location

KhC3:1659560..1666526

Transcript Models and Sequences

KH2012:KH.C3.135.v1.A.SL1-1
KH2012:KH.C3.135.v1.A.SL2-1

External Database Gene Card

External database links

4 results

Database	Gene ID
ENSEMBL	ENSCING00000012827
NCBI Reference Sequence	XM_009859675.2
NCBI Reference Sequence	XM_009859676.2
NCBI Reference Sequence	XM_018811323.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg052f13

Plate: R1CiGC23j18

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
Fdx_antiC-bd	ProSiteProfiles	Ferrodoxin-fold anticodon-binding domain
Phenylalanyl-tRNA_Synthase	Pfam	Phenylalanyl-tRNA synthetase
Fdx_antiC-bd	Pfam	Ferrodoxin-fold anticodon-binding domain
Phe-tRNA-synth_IIc_mito	PANTHER	Phenylalanyl-tRNA synthetase, class IIc, mitochondrial
Fdx_antiC-bd_sf	SUPERFAMILY	Ferrodoxin-fold anticodon-binding domain superfamily
Fdx_antiC-bd_sf	Gene3D	Ferrodoxin-fold anticodon-binding domain superfamily
Phe-tRNA-synth_IIc_mito	TIGRFAM	Phenylalanyl-tRNA synthetase, class IIc, mitochondrial
Fdx_antiC-bd	SMART	Ferrodoxin-fold anticodon-binding domain

GOSlim

14 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
cytoplasm	Orthology	cellular component
mitochondrion	Orthology	cellular component
mitochondrial matrix	Orthology	cellular component
cytosol	Blast	cellular component
membrane	Blast	cellular component
ligase activity	Orthology	molecular function
RNA metabolic process	Orthology	biological process
RNA processing	Orthology	biological process
cytoplasmic part	Blast	cellular component
macromolecular complex	Blast	cellular component

GO (Orthology)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
tRNA binding	Hs	molecular function
nucleotide binding	Hs	molecular function
aminoacyl-tRNA ligase activity	Hs	molecular function
phenylalanine-tRNA ligase activity	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
cytoplasm	Hs	cellular component
mitochondrion	Hs	cellular component
mitochondrial matrix	Hs	cellular component
translation	Hs	biological process
tRNA aminoacylation for protein translation	Hs	biological process
phenylalanyl-tRNA aminoacylation	Hs	biological process
tRNA processing	Hs	biological process
ligase activity	Hs	molecular function
tRNA aminoacylation	Hs	biological process

GO (Blast)