Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

ZNF236; ZNF845; ZNF91

Unique Gene ID

Cirobu.g00005896

Gene Model ID

KH2012:KH.C3.697

Location

KhC3:6108128..6127220

External Database Gene Card
Collections

Gateway full ORF

3 results

cien103290

Plate: VES86_E10

cien56092

Plate: VES79_I03

cien144056

Plate: VES92_P19

Gene collection 1 (N. Satoh)

2 results

citb041b10

Plate: R1CiGC32p16

cilv059n12

Plate: R1CiGC44m02

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type SMART Zinc finger C2H2-type

GOSlim

8 results

GO Term Annotation Origin Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding Blast molecular function
nucleic acid binding Blast molecular function
DNA binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
intracellular Blast cellular component
nucleus Blast cellular component
zinc ion binding Blast molecular function
metal ion binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 806 0.0
nucleic acid binding Hs molecular function 806 0.0
DNA binding Hs molecular function 806 0.0
transcription factor activity, sequence-specific DNA binding Hs molecular function 277 6.39e-76
intracellular Hs cellular component 277 6.39e-76
nucleus Hs cellular component 806 0.0
zinc ion binding Hs molecular function 277 6.39e-76
metal ion binding Hs molecular function 806 0.0

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 1.9E-4