Aniseed - Gene card

Gene Card

Best human hits

RGP1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00006254

Gene Model ID

KH2012:KH.C4.184

Location

KhC4:1238998..1250891

Transcript Models and Sequences

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000007998
NCBI Reference Sequence	XM_009859968.2

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl011b02

Plate: R1CiGC09n19

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term	Analysis	Definition
Rgp1	Pfam	Reduced growth phenotype protein 1

GOSlim

11 results

GO Term	Annotation Origin	Type
Golgi membrane	Orthology	cellular component
protein binding	Orthology	molecular function
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
plasma membrane	Orthology	cellular component
membrane	Orthology	cellular component
macromolecular complex	Orthology	cellular component
positive regulation of GTPase activity	Orthology	biological process
enzyme binding	Orthology	molecular function
molecular function regulator	Orthology	molecular function
Golgi apparatus part	Orthology	cellular component

GO (Orthology)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
Golgi membrane	Hs	cellular component
guanyl-nucleotide exchange factor activity	Hs	molecular function
protein binding	Hs	molecular function
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
plasma membrane	Hs	cellular component
membrane	Hs	cellular component
Rab guanyl-nucleotide exchange factor activity	Hs	molecular function
Rab GTPase binding	Hs	molecular function
trans-Golgi network membrane	Hs	cellular component
macromolecular complex	Hs	cellular component
RIC1-RGP1 guanyl-nucleotide exchange factor complex	Hs	cellular component
retrograde transport, endosome to Golgi	Hs	biological process
positive regulation of GTPase activity	Hs	biological process
negative regulation of cellular protein catabolic process	Hs	biological process

GO (Blast)

12 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
Golgi membrane	Hs	cellular component	327	6.71e-110
guanyl-nucleotide exchange factor activity	Hs	molecular function	327	6.71e-110
protein binding	Hs	molecular function	327	6.71e-110
cytoplasm	Hs	cellular component	327	6.71e-110
cytosol	Hs	cellular component	327	6.71e-110
plasma membrane	Hs	cellular component	327	6.71e-110
membrane	Hs	cellular component	327	6.71e-110
Rab guanyl-nucleotide exchange factor activity	Hs	molecular function	327	6.71e-110
Rab GTPase binding	Hs	molecular function	327	6.71e-110
trans-Golgi network membrane	Hs	cellular component	327	6.71e-110
macromolecular complex	Hs	cellular component	327	6.71e-110
RIC1-RGP1 guanyl-nucleotide exchange factor complex	Hs	cellular component	327	6.71e-110

GO (InterProScan)