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Gene Card

Best human hits

CACNA1C; CACNA1D; CACNA1S

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00006918

Gene Model ID

KH2012:KH.C4.795

Location

KhC4:2082266..2101747

Transcript Models and Sequences

  KH2012:KH.C4.795.v1.A.ND1-1

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000007573
Collections

Gene collection 1 (N. Satoh)

2 results

citb049l12

Plate: R1CiGC45d14

cinc029j06

Plate: R1CiGC45b13

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
VDCC_a1su_IQ SMART Voltage-dependent calcium channel, alpha-1 subunit, IQ domain
GPHH_dom Pfam Voltage-dependent L-type calcium channel, IQ-associated domain
Volt_channel_dom_sf Gene3D Voltage-dependent channel domain superfamily
VDCC_a1su_IQ Pfam Voltage-dependent calcium channel, alpha-1 subunit, IQ domain
Ion_trans_dom Pfam Ion transport domain
CAC1F_C Pfam Voltage-gated calcium channel subunit alpha, C-terminal
VDCCAlpha1 PRINTS Voltage-dependent calcium channel, alpha-1 subunit
VDCC_L_a1su PRINTS Voltage-dependent calcium channel, L-type, alpha-1 subunit

GOSlim

41 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
calmodulin binding Orthology molecular function
cytoplasm Orthology cellular component
plasma membrane Orthology cellular component
ion transport Orthology biological process
heart development Orthology biological process
sensory perception of sound Orthology biological process
membrane Orthology cellular component
integral component of membrane Orthology cellular component
metal ion binding Orthology molecular function
transmembrane transport Orthology biological process
visual perception Orthology biological process
neuronal cell body Orthology cellular component
response to stimulus Orthology biological process
metal ion transport Orthology biological process
plasma membrane part Orthology cellular component
macromolecular complex Orthology cellular component
regulation of catalytic activity Orthology biological process
intracellular signal transduction Orthology biological process
G-protein coupled receptor signaling pathway Orthology biological process
regulation of signal transduction Orthology biological process
cellular process Orthology biological process
cell Orthology cellular component
organelle Orthology cellular component
postsynapse Orthology cellular component
neuron part Orthology cellular component
organelle part Orthology cellular component
cytoplasmic part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
cytoskeletal protein binding Orthology molecular function
animal organ development Orthology biological process
protein transport Orthology biological process
regulation of signaling Orthology biological process
cell-cell signaling Orthology biological process
signaling Orthology biological process
monovalent inorganic cation transport Orthology biological process
cell projection part Orthology cellular component
neuron projection Orthology cellular component
immune system process Orthology biological process
cell surface receptor signaling pathway Orthology biological process
immune response Orthology biological process

GO (Orthology)

52 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
ion channel activity Hs molecular function
voltage-gated ion channel activity Hs molecular function
voltage-gated calcium channel activity Hs molecular function
calcium channel activity Hs molecular function
protein binding Hs molecular function
calmodulin binding Hs molecular function
cytoplasm Hs cellular component
plasma membrane Hs cellular component
voltage-gated calcium channel complex Hs cellular component
ion transport Hs biological process
calcium ion transport Hs biological process
muscle contraction Hs biological process
adenylate cyclase-modulating G-protein coupled receptor signaling pathway Hs biological process
positive regulation of cytosolic calcium ion concentration Hs biological process
heart development Hs biological process
sensory perception of sound Hs biological process
high voltage-gated calcium channel activity Hs molecular function
regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion Hs biological process
postsynaptic density Hs cellular component
membrane Hs cellular component
integral component of membrane Hs cellular component
Z disc Hs cellular component
T-tubule Hs cellular component
ankyrin binding Hs molecular function
I band Hs cellular component
ion transmembrane transport Hs biological process
regulation of ion transmembrane transport Hs biological process
sarcolemma Hs cellular component
camera-type eye development Hs biological process
metal ion binding Hs molecular function
regulation of insulin secretion Hs biological process
alpha-actinin binding Hs molecular function
positive regulation of calcium ion transport Hs biological process
transmembrane transport Hs biological process
cardiac conduction Hs biological process
calcium ion import Hs biological process
calcium ion transmembrane transport Hs biological process
voltage-gated calcium channel activity involved in cardiac muscle cell action potential Hs molecular function
membrane depolarization during action potential Hs biological process
voltage-gated calcium channel activity involved in AV node cell action potential Hs molecular function
voltage-gated calcium channel activity involved SA node cell action potential Hs molecular function
regulation of heart rate by cardiac conduction Hs biological process
regulation of potassium ion transmembrane transport Hs biological process
L-type voltage-gated calcium channel complex Hs cellular component
photoreceptor outer segment Hs cellular component
visual perception Hs biological process
neuronal cell body Hs cellular component
T cell homeostasis Hs biological process
perikaryon Hs cellular component
regulation of T cell receptor signaling pathway Hs biological process
response to stimulus Hs biological process
detection of light stimulus involved in visual perception Hs biological process

GO (Blast)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
ion channel activity Hs molecular function 2045 0.0
voltage-gated ion channel activity Hs molecular function 2045 0.0
voltage-gated calcium channel activity Hs molecular function 2045 0.0
calcium channel activity Hs molecular function 2045 0.0
protein binding Hs molecular function 2045 0.0
calmodulin binding Hs molecular function 2045 0.0
cytoplasm Hs cellular component 2045 0.0
plasma membrane Hs cellular component 2045 0.0
voltage-gated calcium channel complex Hs cellular component 2045 0.0
high voltage-gated calcium channel activity Hs molecular function 2045 0.0
postsynaptic density Hs cellular component 2045 0.0
membrane Hs cellular component 2045 0.0
integral component of membrane Hs cellular component 2045 0.0
Z disc Hs cellular component 2045 0.0
T-tubule Hs cellular component 1988 0.0
ankyrin binding Hs molecular function 2018 0.0
I band Hs cellular component 1988 0.0
sarcolemma Hs cellular component 1988 0.0
metal ion binding Hs molecular function 2045 0.0
alpha-actinin binding Hs molecular function 2045 0.0
voltage-gated calcium channel activity involved in cardiac muscle cell action potential Hs molecular function 2045 0.0
voltage-gated calcium channel activity involved in AV node cell action potential Hs molecular function 2045 0.0
voltage-gated calcium channel activity involved SA node cell action potential Hs molecular function 2018 0.0
L-type voltage-gated calcium channel complex Hs cellular component 2045 0.0

GO (InterProScan)

7 results

GO Term Analysis Type e-value
ion channel activity Pfam molecular function 2.0E-70
voltage-gated calcium channel activity PRINTS molecular function 4.4E-65
voltage-gated calcium channel complex PRINTS cellular component 4.4E-65
ion transport Pfam biological process 2.0E-70
membrane Pfam cellular component 2.0E-70
transmembrane transport Pfam biological process 2.0E-70
calcium ion transmembrane transport PRINTS biological process 4.4E-65

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