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Gene Card

Best human hits

DCT; TYR; TYRP1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00009181

Gene Model ID

KH2012:KH.C8.537

Location

KhC8:322272..325697

Transcript Models and Sequences

  KH2012:KH.C8.537.v1.A.ND1-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000004871
NCBI Reference Sequence XM_002129643.1
Collections

Gene collection 1 (N. Satoh)

1 result

citb030d10

Plate: R1CiGC31h05

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

2 results

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Unchr_di-copper_centre Gene3D Uncharacterised domain, di-copper centre
Unchr_di-copper_centre SUPERFAMILY Uncharacterised domain, di-copper centre
Tyrosinase_Cu-bd ProSitePatterns Tyrosinase copper-binding domain
Tyrosinase_Cu-bd PRINTS Tyrosinase copper-binding domain
Tyrosinase_Cu-bd Pfam Tyrosinase copper-binding domain

GOSlim

25 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
nucleus Blast cellular component
cytoplasm Blast cellular component
lysosome Blast cellular component
cytosol Blast cellular component
metabolic process Orthology biological process
membrane Orthology cellular component
integral component of membrane Orthology cellular component
melanosome Orthology cellular component
protein homodimerization activity Orthology molecular function
intracellular membrane-bounded organelle Blast cellular component
metal ion binding Orthology molecular function
protein heterodimerization activity Orthology molecular function
perinuclear region of cytoplasm Blast cellular component
oxidation-reduction process Orthology biological process
catalytic activity Orthology molecular function
cellular aromatic compound metabolic process Orthology biological process
intracellular organelle part Orthology cellular component
whole membrane Orthology cellular component
endosome Orthology cellular component
bounding membrane of organelle Orthology cellular component
cell differentiation Orthology biological process
cytoplasmic vesicle Orthology cellular component
organelle organization Orthology biological process
transition metal ion binding Blast molecular function

GO (Orthology)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
monooxygenase activity Hs molecular function
protein binding Hs molecular function
melanin metabolic process Hs biological process
metabolic process Hs biological process
endosome membrane Hs cellular component
membrane Hs cellular component
integral component of membrane Hs cellular component
oxidoreductase activity Hs molecular function
melanocyte differentiation Hs biological process
clathrin-coated endocytic vesicle membrane Hs cellular component
melanosome organization Hs biological process
melanosome membrane Hs cellular component
melanin biosynthetic process Hs biological process
melanosome Hs cellular component
protein homodimerization activity Hs molecular function
pigmentation Hs biological process
metal ion binding Hs molecular function
protein heterodimerization activity Hs molecular function
oxidation-reduction process Hs biological process

GO (Blast)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
dopachrome isomerase activity Hs molecular function 512 3.34e-178
monooxygenase activity Hs molecular function 528 0.0
monophenol monooxygenase activity Hs molecular function 394 1.71e-132
copper ion binding Hs molecular function 512 3.34e-178
protein binding Hs molecular function 528 0.0
nucleus Hs cellular component 394 1.71e-132
cytoplasm Hs cellular component 512 3.34e-178
lysosome Hs cellular component 394 1.71e-132
Golgi-associated vesicle Hs cellular component 394 1.71e-132
cytosol Hs cellular component 512 3.34e-178
endosome membrane Hs cellular component 528 0.0
membrane Hs cellular component 528 0.0
integral component of membrane Hs cellular component 528 0.0
oxidoreductase activity Hs molecular function 528 0.0
isomerase activity Hs molecular function 512 3.34e-178
clathrin-coated endocytic vesicle membrane Hs cellular component 528 0.0
melanosome membrane Hs cellular component 528 0.0
melanosome Hs cellular component 528 0.0
protein homodimerization activity Hs molecular function 528 0.0
intracellular membrane-bounded organelle Hs cellular component 394 1.71e-132
metal ion binding Hs molecular function 528 0.0
protein heterodimerization activity Hs molecular function 528 0.0
perinuclear region of cytoplasm Hs cellular component 394 1.71e-132

GO (InterProScan)

2 results

GO Term Analysis Type e-value
metabolic process Pfam biological process 1.1E-32
oxidoreductase activity Pfam molecular function 1.1E-32

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