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Gene Card

Best human hits

DAW1; EED; WSB1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00009367

Gene Model ID

KH2012:KH.C8.707

Location

KhC8:5475501..5481993

Transcript Models and Sequences

  KH2012:KH.C8.707.v1.A.nonSL2-1
KH2012:KH.C8.707.v1.R.ND1-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000006948
NCBI Reference Sequence XM_002128576.3
Collections

Gateway full ORF

4 results

cien101458

Plate: VES86_D03

cien105766

Plate: VES86_D20

cien50631

Plate: VES78_N04

cien193840

Plate: VES100_L08

Gene collection 1 (N. Satoh)

2 results

cieg024a19

Plate: R1CiGC19g20

cicl045o23

Plate: R1CiGC13o01

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
Polycomb_EED PANTHER Polycomb protein EED
WD40_repeat ProSiteProfiles WD40 repeat
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily
WD40_repeat SMART WD40 repeat
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
WD40_repeat Pfam WD40 repeat
WD40_repeat_dom ProSiteProfiles WD40-repeat-containing domain
WD40_repeat_CS ProSitePatterns WD40 repeat, conserved site

GOSlim

29 results

GO Term Annotation Origin Type
negative regulation of transcription from RNA polymerase II promoter Orthology biological process
RNA polymerase II core promoter proximal region sequence-specific DNA binding Orthology molecular function
chromatin binding Orthology molecular function
ubiquitin-protein transferase activity Blast molecular function
protein binding Orthology molecular function
intracellular Blast cellular component
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Blast cellular component
cytosol Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
identical protein binding Orthology molecular function
cell projection Blast cellular component
negative regulation of transcription, DNA-templated Orthology biological process
intracellular non-membrane-bounded organelle Orthology cellular component
nuclear lumen Orthology cellular component
organelle organization Orthology biological process
nucleobase-containing compound metabolic process Orthology biological process
regulation of gene expression Orthology biological process
cellular protein modification process Orthology biological process
animal organ development Orthology biological process
central nervous system development Orthology biological process
nucleoplasm part Orthology cellular component
macromolecular complex Orthology cellular component
transferase activity Orthology molecular function
negative regulation of gene expression Orthology biological process
organelle Blast cellular component
plasma membrane region Blast cellular component

GO (Orthology)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function
sex chromatin Hs cellular component
chromatin binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
chromosome Hs cellular component
cytosol Hs cellular component
chromatin organization Hs biological process
regulation of gene expression by genetic imprinting Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
histone methylation Hs biological process
spinal cord development Hs biological process
ESC/E(Z) complex Hs cellular component
histone methyltransferase activity Hs molecular function
identical protein binding Hs molecular function
pronucleus Hs cellular component
negative regulation of gene expression, epigenetic Hs biological process
negative regulation of transcription, DNA-templated Hs biological process
histone methyltransferase activity (H3-K27 specific) Hs molecular function
histone H3-K27 methylation Hs biological process

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 485 2.32e-170
sex chromatin Hs cellular component 485 2.32e-170
chromatin binding Hs molecular function 485 2.32e-170
ubiquitin-protein transferase activity Hs molecular function 69.7 7.60e-13
protein binding Hs molecular function 485 2.32e-170
intracellular Hs cellular component 69.7 7.60e-13
nucleus Hs cellular component 485 2.32e-170
nucleoplasm Hs cellular component 485 2.32e-170
chromosome Hs cellular component 485 2.32e-170
cytoplasm Hs cellular component 70.9 3.34e-13
cytosol Hs cellular component 485 2.32e-170
cilium Hs cellular component 70.9 3.34e-13
ESC/E(Z) complex Hs cellular component 485 2.32e-170
histone methyltransferase activity Hs molecular function 485 2.32e-170
identical protein binding Hs molecular function 485 2.32e-170
cell projection Hs cellular component 70.9 3.34e-13
pronucleus Hs cellular component 485 2.32e-170
histone methyltransferase activity (H3-K27 specific) Hs molecular function 485 2.32e-170

GO (InterProScan)

3 results

GO Term Analysis Type e-value
protein binding Gene3D molecular function 1.1E-121
histone methylation PANTHER biological process 2.0E-149
ESC/E(Z) complex PANTHER cellular component 2.0E-149

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